Protein–RNA interactions for Protein: P05423

POLR3D, DNA-directed RNA polymerase III subunit RPC4, humanhuman

Predicted RBP Predictions only

Length 398 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3DP05423 RASD1-201ENST00000225688 1746 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR3DP05423 PRSS33-204ENST00000576886 1755 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
POLR3DP05423 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
POLR3DP05423 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC23.23■■□□□ 1.31
POLR3DP05423 ANKRD54-211ENST00000609454 825 ntTSL 3 BASIC23.23■■□□□ 1.31
POLR3DP05423 ABBA01031674.1-201ENST00000635145 728 ntBASIC23.23■■□□□ 1.31
POLR3DP05423 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR3DP05423 BID-204ENST00000399767 2129 ntTSL 2 BASIC23.23■■□□□ 1.31
POLR3DP05423 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC23.23■■□□□ 1.31
POLR3DP05423 ZNF510-203ENST00000375231 5616 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR3DP05423 TMEM121B-201ENST00000331437 4954 ntAPPRIS P3 BASIC23.22■■□□□ 1.31
POLR3DP05423 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR3DP05423 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR3DP05423 AC004803.1-203ENST00000539259 501 ntTSL 2 BASIC23.22■■□□□ 1.31
POLR3DP05423 AP005263.1-201ENST00000579126 914 ntTSL 2 BASIC23.22■■□□□ 1.31
POLR3DP05423 AC131212.4-201ENST00000623606 975 ntBASIC23.22■■□□□ 1.31
POLR3DP05423 TMEM44-203ENST00000381975 2197 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
POLR3DP05423 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
POLR3DP05423 DLGAP4-204ENST00000373913 5056 ntAPPRIS P4 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR3DP05423 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
POLR3DP05423 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 FAM53A-202ENST00000461064 2159 ntAPPRIS P1 TSL 2 BASIC23.21■■□□□ 1.31
POLR3DP05423 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 CRTAC1-203ENST00000370597 2890 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 ADGRL1-202ENST00000361434 5610 ntAPPRIS P3 TSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 MIR1238-201ENST00000408483 83 ntBASIC23.21■■□□□ 1.31
POLR3DP05423 AC004980.1-204ENST00000429707 299 ntBASIC23.21■■□□□ 1.31
POLR3DP05423 AC100839.1-201ENST00000559589 577 ntTSL 4 BASIC23.21■■□□□ 1.31
POLR3DP05423 TGIF1-222ENST00000577543 729 ntTSL 3 BASIC23.21■■□□□ 1.31
POLR3DP05423 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC23.21■■□□□ 1.31
POLR3DP05423 KLHL26-205ENST00000599006 989 ntTSL 5 BASIC23.21■■□□□ 1.31
POLR3DP05423 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC23.21■■□□□ 1.31
POLR3DP05423 HLA-A-209ENST00000638375 975 ntBASIC23.21■■□□□ 1.31
POLR3DP05423 KRT8P8-201ENST00000434750 1448 ntBASIC23.21■■□□□ 1.31
POLR3DP05423 NPIPA8-201ENST00000525596 1565 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 ADM-207ENST00000530439 1839 ntTSL 2 BASIC23.21■■□□□ 1.31
POLR3DP05423 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 MORF4L2-AS1-201ENST00000435306 2086 ntTSL 1 (best) BASIC23.21■■□□□ 1.31
POLR3DP05423 NRXN1-226ENST00000626899 2543 ntTSL 2 BASIC23.21■■□□□ 1.31
POLR3DP05423 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR3DP05423 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR3DP05423 CPLX3-201ENST00000395018 2082 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR3DP05423 KIRREL2-202ENST00000347900 2015 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
POLR3DP05423 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC23.2■■□□□ 1.3
POLR3DP05423 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC23.2■■□□□ 1.3
POLR3DP05423 MPC2-201ENST00000271373 798 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR3DP05423 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC23.2■■□□□ 1.3
POLR3DP05423 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC23.2■■□□□ 1.3
POLR3DP05423 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR3DP05423 AC097662.2-201ENST00000641359 267 ntAPPRIS P1 BASIC23.2■■□□□ 1.3
POLR3DP05423 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC23.2■■□□□ 1.3
POLR3DP05423 ZSCAN1-201ENST00000282326 2054 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
POLR3DP05423 AC011511.1-201ENST00000452032 1956 ntAPPRIS P1 TSL 2 BASIC23.2■■□□□ 1.3
POLR3DP05423 GPT-205ENST00000528431 1822 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 FBXL17-205ENST00000542267 5188 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC23.19■■□□□ 1.3
POLR3DP05423 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
POLR3DP05423 FSCN1P1-201ENST00000568912 1481 ntBASIC23.19■■□□□ 1.3
POLR3DP05423 LAMC3-202ENST00000361069 6133 ntAPPRIS P1 TSL 2 BASIC23.19■■□□□ 1.3
POLR3DP05423 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 WNT1-201ENST00000293549 1185 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 CAPN10-203ENST00000352879 862 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 TRAPPC3-204ENST00000373166 1265 ntAPPRIS P1 TSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC23.19■■□□□ 1.3
POLR3DP05423 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC23.19■■□□□ 1.3
POLR3DP05423 AQP4-AS1-204ENST00000582605 525 ntTSL 4 BASIC23.19■■□□□ 1.3
POLR3DP05423 MIR6786-201ENST00000616843 113 ntBASIC23.19■■□□□ 1.3
POLR3DP05423 YTHDF3-214ENST00000621890 2296 ntTSL 5 BASIC23.19■■□□□ 1.3
POLR3DP05423 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC23.18■■□□□ 1.3
POLR3DP05423 GATA5-201ENST00000252997 2595 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR3DP05423 FBXL19-207ENST00000565690 2570 ntAPPRIS ALT2 TSL 5 BASIC23.18■■□□□ 1.3
POLR3DP05423 TMEM234-203ENST00000373593 1411 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
POLR3DP05423 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC23.18■■□□□ 1.3
POLR3DP05423 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC23.18■■□□□ 1.3
POLR3DP05423 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR3DP05423 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC23.18■■□□□ 1.3
POLR3DP05423 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR3DP05423 AL390955.1-201ENST00000428694 934 ntBASIC23.18■■□□□ 1.3
POLR3DP05423 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
POLR3DP05423 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC23.18■■□□□ 1.3
POLR3DP05423 AC026271.3-201ENST00000571884 352 ntBASIC23.18■■□□□ 1.3
POLR3DP05423 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC23.18■■□□□ 1.3
POLR3DP05423 RUVBL2-211ENST00000601968 1641 ntTSL 5 BASIC23.18■■□□□ 1.3
POLR3DP05423 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC23.18■■□□□ 1.3
POLR3DP05423 AC009237.14-201ENST00000609975 1594 ntBASIC23.18■■□□□ 1.3
POLR3DP05423 PLBD1-201ENST00000240617 2426 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR3DP05423 FBLN1-204ENST00000402984 2355 ntTSL 5 BASIC23.18■■□□□ 1.3
POLR3DP05423 TSNAXIP1-202ENST00000415766 2338 ntAPPRIS ALT2 TSL 2 BASIC23.17■■□□□ 1.3
POLR3DP05423 HSPD1-202ENST00000388968 2455 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
POLR3DP05423 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
POLR3DP05423 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
POLR3DP05423 MESTP1-201ENST00000404287 994 ntBASIC23.17■■□□□ 1.3
POLR3DP05423 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
POLR3DP05423 CCDC124-201ENST00000445755 938 ntAPPRIS P1 TSL 2 BASIC23.17■■□□□ 1.3
POLR3DP05423 DBNL-214ENST00000456905 1241 ntTSL 2 BASIC23.17■■□□□ 1.3
POLR3DP05423 AC011506.1-201ENST00000474329 610 ntBASIC23.17■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 26.6 ms