Protein–RNA interactions for Protein: P03897

MT-ND3, NADH-ubiquinone oxidoreductase chain 3, humanhuman

Predictions only

Length 115 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-ND3P03897 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC19.76■□□□□ 0.75
MT-ND3P03897 MARK2-201ENST00000350490 2903 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 IL4I1-201ENST00000341114 2349 ntAPPRIS P4 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC19.76■□□□□ 0.75
MT-ND3P03897 ASPHD2-201ENST00000215906 3357 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.75■□□□□ 0.75
MT-ND3P03897 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 FXYD6-211ENST00000539526 2132 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND3P03897 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC19.75■□□□□ 0.75
MT-ND3P03897 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 SERPINH1P1-201ENST00000419794 1249 ntBASIC19.75■□□□□ 0.75
MT-ND3P03897 ANKRD65-202ENST00000442470 876 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND3P03897 AC084032.1-201ENST00000552324 578 ntTSL 4 BASIC19.75■□□□□ 0.75
MT-ND3P03897 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC19.75■□□□□ 0.75
MT-ND3P03897 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.75■□□□□ 0.75
MT-ND3P03897 POMT2-201ENST00000261534 4876 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
MT-ND3P03897 KCTD20-210ENST00000536244 5345 ntTSL 2 BASIC19.74■□□□□ 0.75
MT-ND3P03897 PDCD10-201ENST00000392750 2067 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 CCNJ-203ENST00000465148 2677 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
MT-ND3P03897 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC19.74■□□□□ 0.75
MT-ND3P03897 DDN-AS1-201ENST00000547395 858 ntTSL 2 BASIC19.74■□□□□ 0.75
MT-ND3P03897 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC19.74■□□□□ 0.75
MT-ND3P03897 TLE3-214ENST00000558939 6004 ntAPPRIS P4 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.74■□□□□ 0.75
MT-ND3P03897 BID-205ENST00000399774 2167 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 TMEM250-201ENST00000418388 2823 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 RAB28-201ENST00000288723 1810 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
MT-ND3P03897 ADGRD2-201ENST00000334810 3244 ntAPPRIS P1 TSL 5 BASIC19.74■□□□□ 0.75
MT-ND3P03897 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 HCCS-201ENST00000321143 2277 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MT-ND3P03897 HLX-201ENST00000366903 2280 ntAPPRIS P2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 FOXP4-202ENST00000373057 3300 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 CLIP2-201ENST00000223398 5563 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MT-ND3P03897 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC19.73■□□□□ 0.75
MT-ND3P03897 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
MT-ND3P03897 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
MT-ND3P03897 LINC00471-201ENST00000313064 1282 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 CBY3-201ENST00000376974 785 ntAPPRIS P1 TSL 2 BASIC19.73■□□□□ 0.75
MT-ND3P03897 ART5-202ENST00000397067 1154 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.73■□□□□ 0.75
MT-ND3P03897 AC091874.3-201ENST00000512672 1195 ntBASIC19.73■□□□□ 0.75
MT-ND3P03897 AC100791.3-201ENST00000617619 330 ntBASIC19.73■□□□□ 0.75
MT-ND3P03897 PTMS-207ENST00000619580 1150 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.73■□□□□ 0.75
MT-ND3P03897 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.73■□□□□ 0.75
MT-ND3P03897 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.73■□□□□ 0.75
MT-ND3P03897 SNRPA-201ENST00000243563 1621 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
MT-ND3P03897 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC19.73■□□□□ 0.75
MT-ND3P03897 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
MT-ND3P03897 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 LINC01356-201ENST00000401018 1819 ntTSL 2 BASIC19.72■□□□□ 0.75
MT-ND3P03897 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
MT-ND3P03897 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 SERF1A-201ENST00000317633 963 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 UNC50-201ENST00000357765 1143 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 HLA-G-202ENST00000376815 851 ntBASIC19.72■□□□□ 0.75
MT-ND3P03897 HLA-G-203ENST00000376818 1127 ntBASIC19.72■□□□□ 0.75
MT-ND3P03897 KRT18P29-201ENST00000397031 1267 ntBASIC19.72■□□□□ 0.75
MT-ND3P03897 LSM12P1-201ENST00000411836 588 ntBASIC19.72■□□□□ 0.75
MT-ND3P03897 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC19.72■□□□□ 0.75
MT-ND3P03897 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC19.72■□□□□ 0.75
MT-ND3P03897 ITM2C-210ENST00000620962 501 ntBASIC19.72■□□□□ 0.75
MT-ND3P03897 MYC-209ENST00000641252 345 ntBASIC19.72■□□□□ 0.75
MT-ND3P03897 HACE1-202ENST00000369125 3102 ntTSL 2 BASIC19.72■□□□□ 0.75
MT-ND3P03897 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
MT-ND3P03897 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 40.6 ms