Protein–RNA interactions for Protein: P00395

MT-CO1, Cytochrome c oxidase subunit 1, humanhuman

Predictions only

Length 513 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MT-CO1P00395 NTAN1-201ENST00000287706 1204 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO1P00395 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO1P00395 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO1P00395 NIFKP9-201ENST00000419265 221 ntBASIC19.9■□□□□ 0.78
MT-CO1P00395 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
MT-CO1P00395 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO1P00395 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO1P00395 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC19.9■□□□□ 0.78
MT-CO1P00395 PLCB2-204ENST00000557821 4517 ntAPPRIS ALT1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO1P00395 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
MT-CO1P00395 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MT-CO1P00395 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.78
MT-CO1P00395 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.89■□□□□ 0.77
MT-CO1P00395 DNAL4-201ENST00000216068 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 BYSL-201ENST00000230340 2029 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC19.89■□□□□ 0.77
MT-CO1P00395 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 GAL3ST4-204ENST00000423751 1695 ntTSL 3 BASIC19.89■□□□□ 0.77
MT-CO1P00395 DALRD3-205ENST00000440857 2014 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.89■□□□□ 0.77
MT-CO1P00395 SNX11-203ENST00000452859 1601 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-CO1P00395 AGTR1-209ENST00000497524 2359 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-CO1P00395 ADM-207ENST00000530439 1839 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-CO1P00395 ANAPC11-207ENST00000572639 578 ntAPPRIS P1 TSL 3 BASIC19.89■□□□□ 0.77
MT-CO1P00395 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.89■□□□□ 0.77
MT-CO1P00395 NTAN1-211ENST00000622833 1049 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-CO1P00395 NTAN1-212ENST00000624579 1115 ntTSL 2 BASIC19.89■□□□□ 0.77
MT-CO1P00395 TGFBR1-201ENST00000374990 5720 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 ADGRG2-210ENST00000379878 4803 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.89■□□□□ 0.77
MT-CO1P00395 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.89■□□□□ 0.77
MT-CO1P00395 PTGER2-201ENST00000245457 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 CCM2-202ENST00000381112 1881 ntAPPRIS ALT2 TSL 2 BASIC19.88■□□□□ 0.77
MT-CO1P00395 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MT-CO1P00395 PCDH8-202ENST00000377942 5088 ntAPPRIS P4 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC19.88■□□□□ 0.77
MT-CO1P00395 SRI-203ENST00000419179 1307 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-CO1P00395 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC19.88■□□□□ 0.77
MT-CO1P00395 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 BABAM1-202ENST00000447614 930 ntAPPRIS ALT2 TSL 5 BASIC19.88■□□□□ 0.77
MT-CO1P00395 AC018521.5-202ENST00000577279 374 ntTSL 3 BASIC19.88■□□□□ 0.77
MT-CO1P00395 AC018521.5-201ENST00000582787 496 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-CO1P00395 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC19.88■□□□□ 0.77
MT-CO1P00395 CR392000.1-201ENST00000624770 1228 ntBASIC19.88■□□□□ 0.77
MT-CO1P00395 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.88■□□□□ 0.77
MT-CO1P00395 LRP8-204ENST00000371454 3322 ntAPPRIS ALT2 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC19.88■□□□□ 0.77
MT-CO1P00395 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.88■□□□□ 0.77
MT-CO1P00395 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 FAM110A-204ENST00000381941 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC19.88■□□□□ 0.77
MT-CO1P00395 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-CO1P00395 ATPAF2-206ENST00000474627 1564 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-CO1P00395 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 GAMT-201ENST00000252288 1121 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 TSPAN14-205ENST00000372158 1095 ntAPPRIS P1 TSL 5 BASIC19.87■□□□□ 0.77
MT-CO1P00395 CCT7-202ENST00000398422 1234 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-CO1P00395 KSR1P1-201ENST00000446298 240 ntBASIC19.87■□□□□ 0.77
MT-CO1P00395 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 ANP32AP1-202ENST00000560832 1074 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC19.87■□□□□ 0.77
MT-CO1P00395 AC026471.5-201ENST00000615068 467 ntBASIC19.87■□□□□ 0.77
MT-CO1P00395 AC004816.2-201ENST00000622856 284 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-CO1P00395 KLHL11-201ENST00000319121 2383 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 COPS7A-222ENST00000626119 1768 ntTSL 3 BASIC19.87■□□□□ 0.77
MT-CO1P00395 MRGPRF-201ENST00000309099 2295 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC19.87■□□□□ 0.77
MT-CO1P00395 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 BID-204ENST00000399767 2129 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-CO1P00395 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC19.87■□□□□ 0.77
MT-CO1P00395 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.87■□□□□ 0.77
MT-CO1P00395 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC19.87■□□□□ 0.77
MT-CO1P00395 EYA2-210ENST00000611592 2612 ntTSL 5 BASIC19.87■□□□□ 0.77
MT-CO1P00395 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MT-CO1P00395 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-CO1P00395 HCN2-201ENST00000251287 3408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-CO1P00395 NEIL3-201ENST00000264596 2408 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-CO1P00395 CSF1-203ENST00000369801 1364 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
MT-CO1P00395 KRT17P2-201ENST00000300992 1314 ntBASIC19.86■□□□□ 0.77
MT-CO1P00395 PLA2G15-202ENST00000413021 1346 ntTSL 2 BASIC19.86■□□□□ 0.77
MT-CO1P00395 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-CO1P00395 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.86■□□□□ 0.77
MT-CO1P00395 TMEM223-201ENST00000307366 1288 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
MT-CO1P00395 TCTEX1D2-201ENST00000325318 673 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms