Protein–RNA interactions for Protein: O75533

SF3B1, Splicing factor 3B subunit 1, humanhuman

Known RBP eCLIP

Length 1,304 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1O75533 PLEKHM1-205ENST00000580205 2385 ntTSL 1 (best)17.08■□□□□ 0.333e-6■■■■■ 137.9
SF3B1O75533 FAM3A-206ENST00000412894 832 ntTSL 517.07■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 AC010326.2-201ENST00000602124 1020 ntAPPRIS P1 TSL 3 BASIC17.07■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 TOM1L2-201ENST00000318094 2259 ntTSL 2 BASIC17.07■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 AHDC1-204ENST00000487743 417 ntTSL 517.06■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 SPATC1L-202ENST00000330205 1182 ntTSL 1 (best) BASIC17.06■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 ABI2-214ENST00000425253 490 ntTSL 317.06■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 CENPT-225ENST00000567985 575 ntTSL 417.05■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 DDOST-202ENST00000415136 2126 ntTSL 1 (best) BASIC17.05■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 FBXO15-201ENST00000419743 1708 ntAPPRIS P2 TSL 2 BASIC17.05■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 PROCA1-205ENST00000473751 848 ntTSL 317.04■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 ANXA6-211ENST00000521512 1793 ntTSL 5 BASIC17.04■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 POLR1D-207ENST00000621089 1606 ntTSL 1 (best) BASIC17.03■□□□□ 0.322e-11■■■■■ 137.9
SF3B1O75533 CENPT-212ENST00000564144 599 ntTSL 417.02■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 AC111170.2-201ENST00000585369 768 ntTSL 3 BASIC17.02■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 COMMD5-203ENST00000450361 1573 ntAPPRIS P1 TSL 1 (best) BASIC17.02■□□□□ 0.323e-6■■■■■ 137.9
SF3B1O75533 PANX2-201ENST00000159647 2964 ntTSL 1 (best) BASIC17.01■□□□□ 0.313e-6■■■■■ 137.9
SF3B1O75533 STKLD1-201ENST00000371957 2825 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.313e-6■■■■■ 137.9
SF3B1O75533 ILVBL-201ENST00000263383 2304 ntAPPRIS P1 TSL 1 (best) BASIC17.01■□□□□ 0.313e-6■■■■■ 137.9
SF3B1O75533 MRPL58-204ENST00000584208 593 ntTSL 316.98■□□□□ 0.312e-11■■■■■ 137.9
SF3B1O75533 ZDHHC13-202ENST00000446113 2445 ntAPPRIS P1 TSL 1 (best) BASIC16.97■□□□□ 0.313e-6■■■■■ 137.9
SF3B1O75533 RFC5-204ENST00000454402 1655 ntAPPRIS P1 TSL 1 (best) BASIC16.96■□□□□ 0.313e-6■■■■■ 137.9
SF3B1O75533 REC8-206ENST00000560032 661 ntTSL 216.96■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 PAFAH1B2-203ENST00000526888 1099 ntTSL 216.96■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 FUK-207ENST00000571514 3054 ntTSL 2 BASIC16.95■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 DDOST-206ENST00000602624 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 SP2-201ENST00000376741 3112 ntAPPRIS P1 TSL 1 (best) BASIC16.94■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 EIF2B3-205ENST00000477953 828 ntTSL 516.94■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 AC008758.5-201ENST00000595562 617 ntAPPRIS P1 TSL 4 BASIC16.94■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 INVS-207ENST00000496467 714 ntTSL 216.94■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 RPH3AL-219ENST00000576001 647 ntTSL 316.94■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 ELK1-203ENST00000376983 2258 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 SLC35C2-205ENST00000420518 588 ntTSL 316.93■□□□□ 0.32e-11■■■■■ 137.9
SF3B1O75533 TCF3-214ENST00000590605 541 ntTSL 216.92■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 STK17A-201ENST00000319357 3368 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 TRIM3-213ENST00000533309 1647 ntTSL 216.9■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 SDCCAG8-207ENST00000490065 699 ntTSL 416.9■□□□□ 0.33e-6■■■■■ 137.9
SF3B1O75533 POLR2A-201ENST00000572844 2083 ntAPPRIS P1 TSL 1 (best) BASIC16.89■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 HPS1-202ENST00000338546 1580 ntTSL 1 (best) BASIC16.89■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 CEP70-204ENST00000462419 1021 ntTSL 516.89■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 LMAN2L-209ENST00000480869 569 ntTSL 416.89■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 ZFP36L1-205ENST00000557022 577 ntTSL 516.88■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 CRYBG2-204ENST00000374211 691 ntTSL 316.88■□□□□ 0.292e-11■■■■■ 137.9
SF3B1O75533 TTYH2-206ENST00000529107 2015 ntTSL 2 BASIC16.87■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 RPH3AL-214ENST00000574722 586 ntTSL 416.87■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 RPH3AL-204ENST00000570638 537 ntTSL 516.87■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 TUBGCP2-202ENST00000368562 2685 ntTSL 2 BASIC16.85■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 E2F4-207ENST00000566368 438 ntTSL 316.85■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 ALG13-227ENST00000622997 594 ntTSL 516.85■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 CFLAR-205ENST00000342795 1613 ntTSL 5 BASIC16.84■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 CDR2-206ENST00000567406 567 ntTSL 416.84■□□□□ 0.293e-6■■■■■ 137.9
SF3B1O75533 ASS1-207ENST00000467695 580 ntTSL 216.83■□□□□ 0.283e-6■■■■■ 137.9
SF3B1O75533 GMPPB-201ENST00000308375 3217 ntTSL 2 BASIC16.82■□□□□ 0.283e-6■■■■■ 137.9
SF3B1O75533 MRPL58-201ENST00000301585 890 ntAPPRIS P1 TSL 1 (best) BASIC16.82■□□□□ 0.282e-11■■■■■ 137.9
SF3B1O75533 SSH1-204ENST00000546697 583 ntTSL 316.78■□□□□ 0.283e-6■■■■■ 137.9
SF3B1O75533 LTBP2-205ENST00000556690 5614 ntAPPRIS ALT2 TSL 5 BASIC16.78■□□□□ 0.283e-6■■■■■ 137.9
SF3B1O75533 ICMT-203ENST00000489498 2612 ntTSL 1 (best)16.78■□□□□ 0.283e-6■■■■■ 137.9
SF3B1O75533 POLR1D-204ENST00000465887 2118 ntTSL 216.77■□□□□ 0.282e-11■■■■■ 137.9
SF3B1O75533 PTGES2-210ENST00000487063 638 ntTSL 316.77■□□□□ 0.283e-6■■■■■ 137.9
SF3B1O75533 CCNDBP1-203ENST00000562553 736 ntTSL 216.75■□□□□ 0.272e-11■■■■■ 137.9
SF3B1O75533 EML2-228ENST00000592482 666 ntTSL 216.75■□□□□ 0.272e-11■■■■■ 137.9
SF3B1O75533 RYR1-206ENST00000594335 6263 ntTSL 1 (best)16.75■□□□□ 0.273e-6■■■■■ 137.9
SF3B1O75533 DIXDC1-208ENST00000615255 4825 ntTSL 1 (best) BASIC16.74■□□□□ 0.273e-6■■■■■ 137.9
SF3B1O75533 ZDHHC13-201ENST00000399351 2283 ntTSL 1 (best) BASIC16.73■□□□□ 0.273e-6■■■■■ 137.9
SF3B1O75533 LMAN2L-204ENST00000434865 1163 ntTSL 216.73■□□□□ 0.273e-6■■■■■ 137.9
SF3B1O75533 EBAG9-209ENST00000614147 1179 ntTSL 5 BASIC16.71■□□□□ 0.272e-8■■■■■ 137.9
SF3B1O75533 TMEM44-206ENST00000429560 452 ntTSL 1 (best)16.71■□□□□ 0.271e-16■■■■■ 137.9
SF3B1O75533 RTEL1-TNFRSF6B-202ENST00000482936 4931 ntAPPRIS P5 TSL 2 BASIC16.71■□□□□ 0.273e-6■■■■■ 137.9
SF3B1O75533 CERCAM-209ENST00000483737 481 ntTSL 216.7■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 SERPINF1-206ENST00000571870 739 ntTSL 216.7■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 PRKACA-206ENST00000588209 942 ntTSL 316.7■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 TUBB3-209ENST00000555609 1855 ntTSL 316.69■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 MAP3K3-202ENST00000361733 3529 ntAPPRIS P3 TSL 1 (best) BASIC16.68■□□□□ 0.262e-6■■■■■ 137.9
SF3B1O75533 SNX17-204ENST00000453453 1638 ntTSL 1 (best)16.68■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 MFSD9-206ENST00000438943 2990 ntTSL 516.65■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 BTBD11-205ENST00000490090 4614 ntTSL 2 BASIC16.65■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 JAK1-204ENST00000471473 645 ntTSL 316.65■□□□□ 0.263e-6■■■■■ 137.9
SF3B1O75533 PDE1B-201ENST00000243052 3444 ntAPPRIS P1 TSL 1 (best) BASIC16.64■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 MVK-204ENST00000535044 548 ntTSL 416.63■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 TSPAN32-204ENST00000381121 999 ntAPPRIS ALT2 TSL 5 BASIC16.63■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 TMEM106B-203ENST00000420833 1492 ntTSL 1 (best)16.63■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 LMAN2L-206ENST00000446780 1400 ntTSL 216.63■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 RAD9A-211ENST00000622583 565 ntTSL 216.62■□□□□ 0.252e-11■■■■■ 137.9
SF3B1O75533 ZNF799-201ENST00000419318 3036 ntTSL 2 BASIC16.61■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 LMF1-203ENST00000545827 2731 ntTSL 216.61■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 BLVRA-202ENST00000402924 1161 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 LARP4-217ENST00000551886 586 ntTSL 216.61■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 RASGRP4-211ENST00000589100 2303 ntTSL 516.61■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 MAEA-204ENST00000503162 2069 ntTSL 216.59■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 ILVBL-212ENST00000598709 747 ntTSL 516.59■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 AP000253.1-201ENST00000449339 2233 ntTSL 3 BASIC16.59■□□□□ 0.253e-6■■■■■ 137.9
SF3B1O75533 LARP4-220ENST00000615080 856 ntTSL 5 BASIC16.58■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 CD55-204ENST00000367064 2760 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 CBX8-201ENST00000269385 3791 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 ICMT-201ENST00000343813 4771 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 CHFR-214ENST00000536932 584 ntTSL 416.55■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 PHB-201ENST00000300408 1832 ntAPPRIS P1 TSL 1 (best) BASIC16.53■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 CALU-205ENST00000535011 3210 ntTSL 1 (best) BASIC16.53■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 AHRR-201ENST00000316418 5661 ntAPPRIS P3 TSL 1 (best) BASIC16.53■□□□□ 0.243e-6■■■■■ 137.9
SF3B1O75533 BBS7-202ENST00000502444 725 ntTSL 216.52■□□□□ 0.243e-6■■■■■ 137.9
Retrieved 100 of 46,956 protein–RNA pairs in 1406.6 ms