Protein–RNA interactions for Protein: O75487

GPC4, Glypican-4, humanhuman

Predictions only

Length 556 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GPC4O75487 TMEM8A-201ENST00000250930 2346 ntAPPRIS ALT2 TSL 2 BASIC19.43■□□□□ 0.7
GPC4O75487 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GPC4O75487 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.43■□□□□ 0.7
GPC4O75487 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC19.43■□□□□ 0.7
GPC4O75487 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.43■□□□□ 0.7
GPC4O75487 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 GCHFR-201ENST00000260447 777 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 MCHR1-202ENST00000381433 1219 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 EP300-AS1-201ENST00000420537 457 ntTSL 3 BASIC19.43■□□□□ 0.7
GPC4O75487 NAA60-204ENST00000421765 1045 ntTSL 2 BASIC19.43■□□□□ 0.7
GPC4O75487 CD99P1-205ENST00000527459 561 ntBASIC19.43■□□□□ 0.7
GPC4O75487 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC19.43■□□□□ 0.7
GPC4O75487 BRSK2-215ENST00000544817 1842 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 AC116351.2-201ENST00000606540 1585 ntBASIC19.43■□□□□ 0.7
GPC4O75487 AP001271.2-201ENST00000624018 1556 ntBASIC19.43■□□□□ 0.7
GPC4O75487 EHMT1-203ENST00000460843 5137 ntAPPRIS P2 TSL 5 BASIC19.43■□□□□ 0.7
GPC4O75487 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC19.43■□□□□ 0.7
GPC4O75487 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC19.42■□□□□ 0.7
GPC4O75487 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC19.42■□□□□ 0.7
GPC4O75487 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 CACNA1A-227ENST00000636549 6792 ntAPPRIS ALT2 TSL 5 BASIC19.42■□□□□ 0.7
GPC4O75487 SYNM-202ENST00000336292 7394 ntAPPRIS P4 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 CHST11-205ENST00000549260 5696 ntAPPRIS ALT1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 STRBP-201ENST00000348403 3337 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC4O75487 GPRC5B-201ENST00000300571 5213 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC4O75487 KCNC3-203ENST00000477616 3176 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 CALM3-202ENST00000391918 702 ntTSL 2 BASIC19.42■□□□□ 0.7
GPC4O75487 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC19.42■□□□□ 0.7
GPC4O75487 TMEM9-209ENST00000485839 938 ntAPPRIS P3 TSL 2 BASIC19.42■□□□□ 0.7
GPC4O75487 AC026366.1-201ENST00000488803 879 ntBASIC19.42■□□□□ 0.7
GPC4O75487 SCARA5-203ENST00000518030 1074 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 AP003097.1-201ENST00000530657 1135 ntBASIC19.42■□□□□ 0.7
GPC4O75487 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.42■□□□□ 0.7
GPC4O75487 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC19.42■□□□□ 0.7
GPC4O75487 C17orf50-201ENST00000603305 569 ntTSL 3 BASIC19.42■□□□□ 0.7
GPC4O75487 C17orf50-203ENST00000605587 1018 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 AC005225.2-202ENST00000617980 408 ntTSL 4 BASIC19.42■□□□□ 0.7
GPC4O75487 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC19.42■□□□□ 0.7
GPC4O75487 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 MAP3K6-207ENST00000493901 4309 ntAPPRIS P1 TSL 5 BASIC19.42■□□□□ 0.7
GPC4O75487 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC19.42■□□□□ 0.7
GPC4O75487 NFS1-214ENST00000541387 1436 ntTSL 2 BASIC19.42■□□□□ 0.7
GPC4O75487 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC19.42■□□□□ 0.7
GPC4O75487 SSR1-204ENST00000474597 1808 ntTSL 5 BASIC19.41■□□□□ 0.7
GPC4O75487 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 FAM216A-201ENST00000377673 1582 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 C6orf48-205ENST00000375640 1053 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 MMAB-206ENST00000540016 945 ntTSL 3 BASIC19.41■□□□□ 0.7
GPC4O75487 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC19.41■□□□□ 0.7
GPC4O75487 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 ZNF264-205ENST00000599653 705 ntTSL 2 BASIC19.41■□□□□ 0.7
GPC4O75487 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC19.41■□□□□ 0.7
GPC4O75487 VAV1-201ENST00000304076 2825 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 ZDHHC24-203ENST00000526986 1424 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 AP000974.1-201ENST00000623909 2387 ntBASIC19.41■□□□□ 0.7
GPC4O75487 MAPT-209ENST00000446361 5345 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC19.41■□□□□ 0.7
GPC4O75487 AC018553.1-201ENST00000616682 1458 ntBASIC19.41■□□□□ 0.7
GPC4O75487 AC005332.7-201ENST00000614046 2005 ntBASIC19.41■□□□□ 0.7
GPC4O75487 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 FGFR3-205ENST00000440486 4287 ntAPPRIS P3 TSL 5 BASIC19.4■□□□□ 0.7
GPC4O75487 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GPC4O75487 ISLR2-208ENST00000565159 2824 ntAPPRIS P1 TSL 3 BASIC19.4■□□□□ 0.7
GPC4O75487 CD82-201ENST00000227155 2289 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 CLDN14-202ENST00000399135 1752 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
GPC4O75487 CD99-203ENST00000381184 918 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
GPC4O75487 POM121L13P-201ENST00000422362 380 ntBASIC19.4■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 16.1 ms