Protein–RNA interactions for Protein: O60810

PRAMEF4, PRAME family member 4, humanhuman

Predictions only

Length 478 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRAMEF4O60810 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 DMRT2-204ENST00000382251 2292 ntAPPRIS P1 TSL 5 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 IMPDH1-214ENST00000496200 2283 ntTSL 2 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC18.71■□□□□ 0.59
PRAMEF4O60810 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
PRAMEF4O60810 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC18.71■□□□□ 0.58
PRAMEF4O60810 YBX3-201ENST00000228251 1796 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 LINC01465-201ENST00000408887 1940 ntBASIC18.7■□□□□ 0.58
PRAMEF4O60810 REPS1-203ENST00000409812 2511 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 HOXD11-201ENST00000249504 1533 ntAPPRIS P1 TSL 3 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 TEX21P-204ENST00000641479 1693 ntBASIC18.7■□□□□ 0.58
PRAMEF4O60810 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 MORF4L1-201ENST00000331268 2359 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 AC018445.3-201ENST00000624177 1945 ntBASIC18.7■□□□□ 0.58
PRAMEF4O60810 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 ILKAP-201ENST00000254654 1490 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 CEACAM3-202ENST00000357396 1316 ntAPPRIS P3 TSL 1 (best) BASIC18.7■□□□□ 0.58
PRAMEF4O60810 AGAP5-203ENST00000581191 2779 ntAPPRIS ALT2 TSL 5 BASIC18.7■□□□□ 0.58
PRAMEF4O60810 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 FAM239A-202ENST00000438107 2155 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 FGFR1-241ENST00000619564 5482 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 PLPBP-201ENST00000328195 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 PFN3-201ENST00000358571 530 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 AC027451.1-201ENST00000530667 553 ntTSL 4 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 AC006058.3-201ENST00000606217 1069 ntBASIC18.69■□□□□ 0.58
PRAMEF4O60810 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 CNNM4-201ENST00000377075 4800 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 TADA2B-204ENST00000512388 1343 ntTSL 5 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 TMEM175-220ENST00000515740 1514 ntTSL 3 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 CDK17-203ENST00000543119 2442 ntTSL 2 BASIC18.69■□□□□ 0.58
PRAMEF4O60810 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
PRAMEF4O60810 CECR2-202ENST00000342247 6178 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 LY6E-205ENST00000519611 635 ntTSL 3 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 PRKY-204ENST00000533551 1019 ntBASIC18.68■□□□□ 0.58
PRAMEF4O60810 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 RN7SL471P-201ENST00000580476 299 ntBASIC18.68■□□□□ 0.58
PRAMEF4O60810 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 RHOT2-201ENST00000315082 2539 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC18.68■□□□□ 0.58
PRAMEF4O60810 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
PRAMEF4O60810 HGFAC-204ENST00000511533 2016 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 ZFYVE9-201ENST00000287727 5194 ntAPPRIS P4 TSL 5 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 KRASP1-201ENST00000407852 552 ntBASIC18.67■□□□□ 0.58
PRAMEF4O60810 METTL21A-204ENST00000425132 869 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 POU5F1P3-201ENST00000428824 1078 ntBASIC18.67■□□□□ 0.58
PRAMEF4O60810 AC128676.1-201ENST00000454392 318 ntBASIC18.67■□□□□ 0.58
PRAMEF4O60810 CRIP2-202ENST00000483017 1176 ntTSL 2 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
PRAMEF4O60810 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC18.67■□□□□ 0.58
PRAMEF4O60810 ASCC1-205ENST00000394919 2683 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 20.2 ms