Protein–RNA interactions for Protein: O60225

SSX5, Protein SSX5, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSX5O60225 ADCY8-201ENST00000286355 5938 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX5O60225 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC16.62■□□□□ 0.25
SSX5O60225 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC16.62■□□□□ 0.25
SSX5O60225 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC16.62■□□□□ 0.25
SSX5O60225 MAGED2-203ENST00000375053 2066 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 TACC1-202ENST00000317827 7802 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX5O60225 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX5O60225 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 GOLGA4-212ENST00000617480 1545 ntTSL 5 BASIC16.61■□□□□ 0.25
SSX5O60225 ADK-206ENST00000541550 2222 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX5O60225 CPSF3-201ENST00000238112 2345 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 TIMM13-201ENST00000215570 1973 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 FBXW11-202ENST00000296933 4539 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 RUBCNL-203ENST00000378787 2731 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX5O60225 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 LYRM9-201ENST00000379102 501 ntAPPRIS P1 TSL 2 BASIC16.61■□□□□ 0.25
SSX5O60225 MOSPD3-203ENST00000393950 1191 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 KRT19P1-201ENST00000405746 1186 ntBASIC16.61■□□□□ 0.25
SSX5O60225 LINC01659-202ENST00000449711 917 ntTSL 3 BASIC16.61■□□□□ 0.25
SSX5O60225 TERF1P5-201ENST00000477545 1207 ntBASIC16.61■□□□□ 0.25
SSX5O60225 LYRM9-206ENST00000508862 807 ntTSL 3 BASIC16.61■□□□□ 0.25
SSX5O60225 SP2-202ENST00000613139 908 ntTSL 5 BASIC16.61■□□□□ 0.25
SSX5O60225 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 TNFRSF14-201ENST00000355716 1707 ntAPPRIS P2 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 FGF17-202ENST00000518533 1706 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC16.61■□□□□ 0.25
SSX5O60225 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 CASP16P-201ENST00000428155 1433 ntTSL 1 (best) BASIC16.61■□□□□ 0.25
SSX5O60225 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC16.61■□□□□ 0.25
SSX5O60225 ZNF385A-212ENST00000551109 2369 ntTSL 5 BASIC16.6■□□□□ 0.25
SSX5O60225 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 HNF4A-205ENST00000443598 1603 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC16.6■□□□□ 0.25
SSX5O60225 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC16.6■□□□□ 0.25
SSX5O60225 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 HSPB8-201ENST00000281938 2152 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 HMGXB3-206ENST00000613459 5567 ntAPPRIS ALT2 TSL 5 BASIC16.6■□□□□ 0.25
SSX5O60225 UCHL1-201ENST00000284440 1172 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 PARP1-202ENST00000366792 553 ntTSL 3 BASIC16.6■□□□□ 0.25
SSX5O60225 PGAP3-204ENST00000429199 970 ntTSL 2 BASIC16.6■□□□□ 0.25
SSX5O60225 UCHL1-210ENST00000512788 785 ntTSL 3 BASIC16.6■□□□□ 0.25
SSX5O60225 C1QTNF5-203ENST00000530681 1046 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 AC005837.3-201ENST00000612163 286 ntBASIC16.6■□□□□ 0.25
SSX5O60225 RALB-208ENST00000631312 311 ntTSL 5 BASIC16.6■□□□□ 0.25
SSX5O60225 JADE3-204ENST00000614628 4934 ntAPPRIS P1 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC16.6■□□□□ 0.25
SSX5O60225 CNTNAP3-204ENST00000377656 4986 ntTSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC16.6■□□□□ 0.25
SSX5O60225 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SSX5O60225 ATP2A3-201ENST00000309890 4826 ntTSL 5 BASIC16.6■□□□□ 0.25
SSX5O60225 ZNF771-202ENST00000434417 1454 ntAPPRIS P1 TSL 2 BASIC16.6■□□□□ 0.25
SSX5O60225 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC16.6■□□□□ 0.25
SSX5O60225 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC16.6■□□□□ 0.25
SSX5O60225 RPUSD2-202ENST00000559271 1558 ntAPPRIS ALT2 TSL 2 BASIC16.6■□□□□ 0.25
SSX5O60225 SYNPO-201ENST00000307662 5374 ntAPPRIS P3 TSL 1 (best) BASIC16.6■□□□□ 0.25
SSX5O60225 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 RELB-201ENST00000221452 2294 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 PHGDH-210ENST00000641115 1638 ntBASIC16.59■□□□□ 0.25
SSX5O60225 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 HIPK1-207ENST00000369561 3777 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX5O60225 CFP-201ENST00000247153 1713 ntAPPRIS P2 TSL 5 BASIC16.59■□□□□ 0.25
SSX5O60225 SNX14-210ENST00000505648 3193 ntTSL 2 BASIC16.59■□□□□ 0.25
SSX5O60225 EFR3A-201ENST00000254624 5438 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 PTPA-206ENST00000358994 2664 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 PFDN6-206ENST00000463584 1915 ntTSL 3 BASIC16.59■□□□□ 0.25
SSX5O60225 ANKRD17-211ENST00000639793 3486 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX5O60225 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSX5O60225 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX5O60225 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 BRD2-214ENST00000496118 735 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC16.59■□□□□ 0.25
SSX5O60225 AC010536.3-201ENST00000620306 533 ntBASIC16.59■□□□□ 0.25
SSX5O60225 AL831711.1-201ENST00000636824 569 ntTSL 4 BASIC16.59■□□□□ 0.25
SSX5O60225 GAS2L1P2-201ENST00000436355 1356 ntBASIC16.59■□□□□ 0.25
SSX5O60225 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC16.59■□□□□ 0.25
SSX5O60225 DCAF8-211ENST00000475733 1426 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 YTHDF3-212ENST00000621413 2370 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX5O60225 TSSK6-201ENST00000585580 1467 ntAPPRIS P1 BASIC16.59■□□□□ 0.25
SSX5O60225 CDK11A-205ENST00000378633 2458 ntTSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SSX5O60225 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC16.59■□□□□ 0.25
SSX5O60225 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC16.59■□□□□ 0.25
SSX5O60225 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
Retrieved 100 of 98,524 protein–RNA pairs in 44.6 ms