Protein–RNA interactions for Protein: O43731

KDELR3, ER lumen protein-retaining receptor 3, humanhuman

Predictions only

Length 214 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KDELR3O43731 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.76■□□□□ 0.75
KDELR3O43731 PUF60-202ENST00000349157 1821 ntAPPRIS ALT2 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 ZNF815P-204ENST00000434898 1737 ntBASIC19.76■□□□□ 0.75
KDELR3O43731 SHB-201ENST00000377707 2783 ntAPPRIS P1 TSL 1 (best) BASIC19.76■□□□□ 0.75
KDELR3O43731 CDO1-201ENST00000250535 1860 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 SOX12-201ENST00000342665 4630 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KDELR3O43731 ZBED3-201ENST00000255198 6172 ntAPPRIS P2 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC19.75■□□□□ 0.75
KDELR3O43731 AC004080.6-201ENST00000467897 919 ntTSL 5 BASIC19.75■□□□□ 0.75
KDELR3O43731 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC19.75■□□□□ 0.75
KDELR3O43731 AC016582.3-201ENST00000589653 561 ntTSL 4 BASIC19.75■□□□□ 0.75
KDELR3O43731 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC19.75■□□□□ 0.75
KDELR3O43731 LACTB-202ENST00000413507 2978 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 INTS11-250ENST00000620829 1862 ntTSL 2 BASIC19.75■□□□□ 0.75
KDELR3O43731 NAT6-201ENST00000354862 1330 ntAPPRIS P3 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 PNKP-207ENST00000596014 1665 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 SMARCD2-203ENST00000448276 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
KDELR3O43731 LINC01465-201ENST00000408887 1940 ntBASIC19.74■□□□□ 0.75
KDELR3O43731 GPBAR1-202ENST00000519574 1382 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 PGAM5-203ENST00000498926 2834 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 FMR1-208ENST00000440235 4271 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.74■□□□□ 0.75
KDELR3O43731 PRSS3-201ENST00000342836 1144 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 FAM86C1-203ENST00000426628 952 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 NUDT16P1-203ENST00000513809 620 ntBASIC19.74■□□□□ 0.75
KDELR3O43731 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 AKIP1-206ENST00000525005 1128 ntTSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC19.74■□□□□ 0.75
KDELR3O43731 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC19.74■□□□□ 0.75
KDELR3O43731 AC026471.5-201ENST00000615068 467 ntBASIC19.74■□□□□ 0.75
KDELR3O43731 IL17RC-203ENST00000403601 2388 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 AC104417.2-201ENST00000562989 1793 ntBASIC19.74■□□□□ 0.75
KDELR3O43731 SNX18-203ENST00000381410 5218 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 ITGA4-202ENST00000339307 1403 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 FAM129C-208ENST00000599164 2073 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
KDELR3O43731 TMEM189-201ENST00000371650 2222 ntAPPRIS ALT1 TSL 1 (best) BASIC19.74■□□□□ 0.75
KDELR3O43731 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.74■□□□□ 0.75
KDELR3O43731 UBE2H-201ENST00000355621 5151 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDELR3O43731 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDELR3O43731 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDELR3O43731 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDELR3O43731 FAM26F-202ENST00000368605 1117 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 RAMP1-204ENST00000409726 734 ntTSL 3 BASIC19.73■□□□□ 0.75
KDELR3O43731 AL355355.2-201ENST00000442321 338 ntBASIC19.73■□□□□ 0.75
KDELR3O43731 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.73■□□□□ 0.75
KDELR3O43731 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC19.73■□□□□ 0.75
KDELR3O43731 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 AC026271.3-201ENST00000571884 352 ntBASIC19.73■□□□□ 0.75
KDELR3O43731 MIR4785-201ENST00000585005 73 ntBASIC19.73■□□□□ 0.75
KDELR3O43731 CRTC1-204ENST00000601916 1834 ntTSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 ATP9A-202ENST00000338821 8106 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDELR3O43731 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDELR3O43731 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 KRT17P2-201ENST00000300992 1314 ntBASIC19.73■□□□□ 0.75
KDELR3O43731 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
KDELR3O43731 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC19.73■□□□□ 0.75
KDELR3O43731 TOR1B-201ENST00000259339 2769 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC19.72■□□□□ 0.75
KDELR3O43731 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC19.72■□□□□ 0.75
KDELR3O43731 DENND6A-201ENST00000311128 4655 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC19.72■□□□□ 0.75
KDELR3O43731 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 AKAP8L-201ENST00000397410 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 HAUS1-201ENST00000282058 1125 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 RAC3-201ENST00000306897 1090 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC19.72■□□□□ 0.75
KDELR3O43731 POLI-202ENST00000406285 2030 ntTSL 2 BASIC19.72■□□□□ 0.75
KDELR3O43731 LINC00620-201ENST00000419618 996 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
KDELR3O43731 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC19.72■□□□□ 0.75
KDELR3O43731 PTPA-216ENST00000432651 857 ntTSL 2 BASIC19.72■□□□□ 0.75
KDELR3O43731 AC116562.2-201ENST00000507042 360 ntBASIC19.72■□□□□ 0.75
KDELR3O43731 DHDH-203ENST00000522614 776 ntTSL 5 BASIC19.72■□□□□ 0.75
KDELR3O43731 AC006504.5-207ENST00000586220 487 ntTSL 2 BASIC19.72■□□□□ 0.75
KDELR3O43731 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.72■□□□□ 0.75
KDELR3O43731 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.72■□□□□ 0.75
KDELR3O43731 PCDHA13-203ENST00000617769 2427 ntAPPRIS ALT2 BASIC19.72■□□□□ 0.75
KDELR3O43731 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
KDELR3O43731 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms