Protein–RNA interactions for Protein: O15499

GSC2, Homeobox protein goosecoid-2, humanhuman

Predictions only

Length 205 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GSC2O15499 VPS26A-202ENST00000373382 3229 ntAPPRIS P1 TSL 5 BASIC18.68■□□□□ 0.58
GSC2O15499 PRKRIP1-208ENST00000496391 3430 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 TSPAN4-206ENST00000397408 1430 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 SGSM2-201ENST00000268989 4863 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 ARHGAP24-206ENST00000503995 1273 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 AP003071.3-201ENST00000562506 366 ntTSL 3 BASIC18.68■□□□□ 0.58
GSC2O15499 ACAP1-206ENST00000571471 320 ntTSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 RPL17-204ENST00000579248 790 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 CRTC1-201ENST00000321949 2501 ntAPPRIS P3 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 NOMO3-202ENST00000399336 4356 ntAPPRIS P2 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 CARNS1-205ENST00000531040 2968 ntTSL 5 BASIC18.68■□□□□ 0.58
GSC2O15499 NFATC1-210ENST00000587635 2195 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 SPART-209ENST00000494062 3018 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC18.68■□□□□ 0.58
GSC2O15499 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
GSC2O15499 C19orf25-203ENST00000585675 1837 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 NPNT-203ENST00000427316 2481 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
GSC2O15499 KRT8P20-201ENST00000423953 1409 ntBASIC18.67■□□□□ 0.58
GSC2O15499 PCOLCE-AS1-201ENST00000442166 2537 ntTSL 2 BASIC18.67■□□□□ 0.58
GSC2O15499 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.67■□□□□ 0.58
GSC2O15499 PSTPIP1-203ENST00000558012 1896 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 GNAS-AS1-202ENST00000443966 2341 ntTSL 5 BASIC18.67■□□□□ 0.58
GSC2O15499 CERKL-201ENST00000339098 1677 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 SCYL1-203ENST00000420247 2583 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
GSC2O15499 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.67■□□□□ 0.58
GSC2O15499 AC012313.1-201ENST00000593393 3059 ntBASIC18.67■□□□□ 0.58
GSC2O15499 DNAJC4-202ENST00000321685 1288 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 MANBAL-202ENST00000373606 1208 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 SENCR-201ENST00000526269 1298 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 DNAJC4-212ENST00000628077 938 ntTSL 5 BASIC18.67■□□□□ 0.58
GSC2O15499 CCDC71-201ENST00000321895 1781 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC18.67■□□□□ 0.58
GSC2O15499 ARSA-203ENST00000395619 1824 ntAPPRIS P1 TSL 5 BASIC18.67■□□□□ 0.58
GSC2O15499 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC18.67■□□□□ 0.58
GSC2O15499 TCTN1-225ENST00000551590 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 WDR45-207ENST00000376372 1639 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 BAIAP2L2-202ENST00000381669 2146 ntAPPRIS P2 TSL 1 (best) BASIC18.67■□□□□ 0.58
GSC2O15499 MEF2A-204ENST00000557785 2854 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
GSC2O15499 PHGDH-210ENST00000641115 1638 ntBASIC18.67■□□□□ 0.58
GSC2O15499 ATP2A2-201ENST00000308664 4453 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 TUBA4A-201ENST00000248437 2162 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 PYCR1-216ENST00000619204 1904 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
GSC2O15499 HPS3-202ENST00000460120 2745 ntTSL 2 BASIC18.66■□□□□ 0.58
GSC2O15499 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 ENTPD8-202ENST00000371506 2222 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GSC2O15499 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC18.66■□□□□ 0.58
GSC2O15499 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 CAPZB-205ENST00000433834 1462 ntTSL 2 BASIC18.66■□□□□ 0.58
GSC2O15499 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 PEMT-201ENST00000255389 1013 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 AC099791.1-201ENST00000416440 715 ntBASIC18.66■□□□□ 0.58
GSC2O15499 AFG3L1P-203ENST00000418696 2965 ntTSL 2 BASIC18.66■□□□□ 0.58
GSC2O15499 TYROBP-203ENST00000544690 522 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 SEC23A-213ENST00000557280 561 ntTSL 4 BASIC18.66■□□□□ 0.58
GSC2O15499 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC18.66■□□□□ 0.58
GSC2O15499 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC18.66■□□□□ 0.58
GSC2O15499 MIR663AHG-233ENST00000609248 830 ntTSL 5 BASIC18.66■□□□□ 0.58
GSC2O15499 UBQLN4-201ENST00000368309 3576 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 WBP2-219ENST00000626827 1867 ntTSL 5 BASIC18.66■□□□□ 0.58
GSC2O15499 IRS2-201ENST00000375856 8138 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 DMRTA2-201ENST00000404795 3137 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
GSC2O15499 MCU-201ENST00000357157 2874 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 SHISA3-201ENST00000319234 1971 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC18.66■□□□□ 0.58
GSC2O15499 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 LLGL2-202ENST00000375227 1374 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
GSC2O15499 FBXL22-202ENST00000534939 2443 ntAPPRIS ALT2 TSL 3 BASIC18.65■□□□□ 0.58
GSC2O15499 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.65■□□□□ 0.58
GSC2O15499 FUZ-212ENST00000528094 1479 ntTSL 2 BASIC18.65■□□□□ 0.58
GSC2O15499 GLIS1-201ENST00000312233 2812 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
GSC2O15499 FAM129C-202ENST00000335393 2508 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 OLFM1-201ENST00000252854 2591 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 NOP9-202ENST00000396802 1942 ntTSL 5 BASIC18.65■□□□□ 0.58
GSC2O15499 SLCO4A1-202ENST00000370507 2665 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.65■□□□□ 0.58
GSC2O15499 MTMR1-208ENST00000445323 4516 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.65■□□□□ 0.58
GSC2O15499 TMEM218-201ENST00000279968 1034 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 PPCS-202ENST00000372560 793 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
GSC2O15499 HES3-201ENST00000377898 697 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 24.8 ms