Protein–RNA interactions for Protein: O14579

COPE, Coatomer subunit epsilon, humanhuman

Predictions only

Length 308 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COPEO14579 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC19.41■□□□□ 0.7
COPEO14579 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC19.41■□□□□ 0.7
COPEO14579 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 HACD1-201ENST00000326961 773 ntTSL 2 BASIC19.41■□□□□ 0.7
COPEO14579 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC19.41■□□□□ 0.7
COPEO14579 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 AC137761.2-201ENST00000561729 223 ntBASIC19.41■□□□□ 0.7
COPEO14579 AC145350.3-201ENST00000569033 163 ntBASIC19.41■□□□□ 0.7
COPEO14579 AC069236.1-201ENST00000604339 616 ntBASIC19.41■□□□□ 0.7
COPEO14579 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC19.41■□□□□ 0.7
COPEO14579 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 AL589743.5-201ENST00000616611 1050 ntBASIC19.41■□□□□ 0.7
COPEO14579 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 SEPT9-246ENST00000592951 1793 ntAPPRIS ALT2 TSL 2 BASIC19.41■□□□□ 0.7
COPEO14579 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.41■□□□□ 0.7
COPEO14579 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.41■□□□□ 0.7
COPEO14579 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC19.41■□□□□ 0.7
COPEO14579 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC19.41■□□□□ 0.7
COPEO14579 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC19.4■□□□□ 0.7
COPEO14579 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 STX6-201ENST00000258301 4851 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 AP001005.4-202ENST00000575325 560 ntTSL 4 BASIC19.4■□□□□ 0.7
COPEO14579 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 FNBP1-202ENST00000420781 5410 ntAPPRIS ALT1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC19.4■□□□□ 0.7
COPEO14579 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.4■□□□□ 0.7
COPEO14579 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC19.4■□□□□ 0.7
COPEO14579 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPEO14579 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPEO14579 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPEO14579 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
COPEO14579 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPEO14579 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.7
COPEO14579 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.7
COPEO14579 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC19.39■□□□□ 0.69
COPEO14579 UNC5B-201ENST00000335350 6841 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 BHLHA9-201ENST00000391429 902 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
COPEO14579 BET1L-204ENST00000410108 637 ntTSL 3 BASIC19.39■□□□□ 0.69
COPEO14579 AC034268.1-201ENST00000441047 882 ntBASIC19.39■□□□□ 0.69
COPEO14579 TMEM70-203ENST00000517439 617 ntTSL 2 BASIC19.39■□□□□ 0.69
COPEO14579 SLC25A45-206ENST00000526432 894 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 AC011825.4-201ENST00000582233 473 ntTSL 2 BASIC19.39■□□□□ 0.69
COPEO14579 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC19.39■□□□□ 0.69
COPEO14579 MBD3L1-202ENST00000595891 872 ntAPPRIS P1 TSL 2 BASIC19.39■□□□□ 0.69
COPEO14579 H2AFB3-201ENST00000615853 591 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
COPEO14579 AC008694.1-202ENST00000636953 945 ntBASIC19.39■□□□□ 0.69
COPEO14579 AC007613.1-201ENST00000572811 2597 ntBASIC19.39■□□□□ 0.69
COPEO14579 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC19.39■□□□□ 0.69
COPEO14579 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC19.39■□□□□ 0.69
COPEO14579 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC19.39■□□□□ 0.69
COPEO14579 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC19.39■□□□□ 0.69
COPEO14579 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.39■□□□□ 0.69
COPEO14579 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
COPEO14579 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC19.39■□□□□ 0.69
COPEO14579 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
COPEO14579 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPEO14579 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
COPEO14579 CDK5R1-201ENST00000313401 4325 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 27.1 ms