Protein–RNA interactions for Protein: O00400

SLC33A1, Acetyl-coenzyme A transporter 1, humanhuman

Predicted RBP Predictions only

Length 549 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC33A1O00400 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC33A1O00400 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC16.59■□□□□ 0.25
SLC33A1O00400 ST3GAL3-204ENST00000335430 1805 ntTSL 5 BASIC16.59■□□□□ 0.25
SLC33A1O00400 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC33A1O00400 HSPA8-202ENST00000453788 2004 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC33A1O00400 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC16.58■□□□□ 0.25
SLC33A1O00400 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC16.58■□□□□ 0.25
SLC33A1O00400 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC16.58■□□□□ 0.25
SLC33A1O00400 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
SLC33A1O00400 TMEM235-201ENST00000374946 2409 ntTSL 5 BASIC16.58■□□□□ 0.25
SLC33A1O00400 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.25
SLC33A1O00400 MIB2-231ENST00000518681 3116 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 DAG1-201ENST00000308775 5522 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 UNC13A-205ENST00000551649 6052 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC33A1O00400 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC16.58■□□□□ 0.24
SLC33A1O00400 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 DUSP5P2-201ENST00000426873 1033 ntBASIC16.58■□□□□ 0.24
SLC33A1O00400 NME6-213ENST00000451657 871 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 SCO2-203ENST00000535425 1002 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 SNAP23-210ENST00000564153 775 ntTSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 LITAF-205ENST00000570904 1118 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 WT1-AS_3.1-201ENST00000613262 234 ntBASIC16.58■□□□□ 0.24
SLC33A1O00400 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 CTDSP2-204ENST00000548823 1368 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 DDX42-216ENST00000583590 4148 ntAPPRIS P1 TSL 5 BASIC16.58■□□□□ 0.24
SLC33A1O00400 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC33A1O00400 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 DHX33-201ENST00000225296 5618 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 NRL-206ENST00000561028 2103 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
SLC33A1O00400 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 RELB-202ENST00000505236 2219 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.24
SLC33A1O00400 HMCES-201ENST00000383463 2515 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC16.58■□□□□ 0.24
SLC33A1O00400 MAPKAPK2-202ENST00000367103 2961 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.58■□□□□ 0.24
SLC33A1O00400 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
SLC33A1O00400 WNK2-201ENST00000297954 7138 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 MEN1-209ENST00000394376 3034 ntAPPRIS P3 TSL 5 BASIC16.57■□□□□ 0.24
SLC33A1O00400 PRMT2-206ENST00000397638 2131 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC33A1O00400 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC16.57■□□□□ 0.24
SLC33A1O00400 KRT83-201ENST00000293670 1875 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 DDHD1-201ENST00000323669 5503 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC33A1O00400 CRACR2B-207ENST00000528542 1792 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 CRK-204ENST00000574295 1391 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC33A1O00400 TAF9-201ENST00000217893 1283 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 TMPO-201ENST00000261210 820 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 NUDT22-201ENST00000279206 1094 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 C16orf74-201ENST00000284245 906 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 NFS1-201ENST00000306750 738 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 MFF-205ENST00000354503 1085 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC33A1O00400 SLC29A4P1-201ENST00000398760 971 ntBASIC16.57■□□□□ 0.24
SLC33A1O00400 TRNT1-207ENST00000420393 854 ntTSL 3 BASIC16.57■□□□□ 0.24
SLC33A1O00400 NCF1B-203ENST00000435988 1254 ntBASIC16.57■□□□□ 0.24
SLC33A1O00400 GUSBP6-202ENST00000438529 1198 ntBASIC16.57■□□□□ 0.24
SLC33A1O00400 NUDT22-204ENST00000441250 986 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC33A1O00400 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC33A1O00400 AC092118.2-201ENST00000613495 667 ntBASIC16.57■□□□□ 0.24
SLC33A1O00400 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC16.57■□□□□ 0.24
SLC33A1O00400 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 NAT16-201ENST00000300303 2935 ntAPPRIS P2 TSL 2 BASIC16.57■□□□□ 0.24
SLC33A1O00400 NOP56-201ENST00000329276 2400 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 UMOD-203ENST00000396138 2399 ntAPPRIS ALT2 TSL 5 BASIC16.57■□□□□ 0.24
SLC33A1O00400 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC16.57■□□□□ 0.24
SLC33A1O00400 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
SLC33A1O00400 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 PLCG1-201ENST00000244007 5285 ntAPPRIS P4 TSL 5 BASIC16.56■□□□□ 0.24
SLC33A1O00400 ARID1A-205ENST00000457599 6268 ntAPPRIS ALT2 TSL 5 BASIC16.56■□□□□ 0.24
SLC33A1O00400 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC33A1O00400 PPM1L-204ENST00000497343 1589 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC33A1O00400 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC33A1O00400 TAF4B-201ENST00000269142 5260 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC33A1O00400 PRDM8-202ENST00000415738 3124 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
SLC33A1O00400 XBP1-202ENST00000344347 1131 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC33A1O00400 GNAS-AS1-201ENST00000424094 1156 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 EVX1-202ENST00000496902 2955 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
SLC33A1O00400 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC16.56■□□□□ 0.24
SLC33A1O00400 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC16.56■□□□□ 0.24
SLC33A1O00400 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
SLC33A1O00400 GNS-208ENST00000543646 2164 ntAPPRIS ALT2 TSL 2 BASIC16.55■□□□□ 0.24
SLC33A1O00400 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
SLC33A1O00400 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 25.3 ms