Protein–RNA interactions for Protein: O00300

TNFRSF11B, Tumor necrosis factor receptor superfamily member 11B, humanhuman

Predictions only

Length 401 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF11BO00300 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 CHRNA4-201ENST00000370263 5577 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 UNKL-204ENST00000389221 5116 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 EVX2-201ENST00000308618 4203 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 HAPLN4-201ENST00000291481 3449 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
TNFRSF11BO00300 GATAD1-201ENST00000287957 3361 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.46
TNFRSF11BO00300 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC17.96■□□□□ 0.46
TNFRSF11BO00300 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 LAD1-202ENST00000391967 2906 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 PRKAR2A-201ENST00000265563 6471 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 UBE2I-203ENST00000397514 2976 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 PRRC2A-201ENST00000376007 6861 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 SPATA22-214ENST00000575375 1374 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 LTB-211ENST00000446745 853 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 LGR4-203ENST00000480977 492 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 WWTR1-AS1-203ENST00000495094 975 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 AC025754.1-201ENST00000507566 407 ntTSL 3 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 ACYP2-207ENST00000606082 713 ntTSL 5 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 C11orf80-214ENST00000532565 1948 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 AC007613.1-201ENST00000572811 2597 ntBASIC17.95■□□□□ 0.46
TNFRSF11BO00300 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 RNASET2-203ENST00000366855 1417 ntTSL 5 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 PRKAR2A-206ENST00000454963 1849 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TNFRSF11BO00300 MSL1-202ENST00000398532 4707 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 PRTN3-201ENST00000234347 1026 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 TP53BP2-201ENST00000343537 4651 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 ZNRF2P3-201ENST00000424200 374 ntBASIC17.94■□□□□ 0.46
TNFRSF11BO00300 CNN2P6-201ENST00000439038 900 ntBASIC17.94■□□□□ 0.46
TNFRSF11BO00300 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 AC137761.2-201ENST00000561729 223 ntBASIC17.94■□□□□ 0.46
TNFRSF11BO00300 AC145350.3-201ENST00000569033 163 ntBASIC17.94■□□□□ 0.46
TNFRSF11BO00300 AC069236.1-201ENST00000604339 616 ntBASIC17.94■□□□□ 0.46
TNFRSF11BO00300 TMEM230-210ENST00000612323 1231 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 AL589743.5-201ENST00000616611 1050 ntBASIC17.94■□□□□ 0.46
TNFRSF11BO00300 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 ZBTB48-202ENST00000377674 2293 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 SPESP1-201ENST00000310673 1431 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 CCNL2-201ENST00000400809 2305 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 SHISA5-220ENST00000619810 2385 ntTSL 2 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 EML3-217ENST00000531557 2509 ntTSL 5 BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 FAM124A-202ENST00000322475 4761 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TNFRSF11BO00300 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 LINC01505-207ENST00000637185 1540 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 CACNA1B-203ENST00000371355 9647 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 MLLT1-201ENST00000252674 4507 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 CACNA1B-206ENST00000371372 9790 ntAPPRIS P4 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 MTX1-201ENST00000316721 1441 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 MRPL39-201ENST00000307301 1199 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 HACD1-201ENST00000326961 773 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 MRPL39-202ENST00000352957 1110 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 HERC2P5-204ENST00000569697 1214 ntTSL 2 BASIC17.93■□□□□ 0.46
TNFRSF11BO00300 CIRBP-222ENST00000589235 1073 ntAPPRIS ALT1 TSL 2 BASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19.4 ms