Protein–RNA interactions for Protein: A6NHR8

FAM47DP, Putative protein FAM47D, humanhuman

Predictions only

Length 397 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FAM47DPA6NHR8 LIN54-209ENST00000510557 2257 ntTSL 2 BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 SH2B3-201ENST00000341259 5406 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 ARHGAP11A-208ENST00000567348 2422 ntTSL 1 (best) BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC20.21■□□□□ 0.83
FAM47DPA6NHR8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 MARK1-205ENST00000611084 5321 ntAPPRIS ALT1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 AHRR-204ENST00000506456 2350 ntTSL 2 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 KIF26A-202ENST00000423312 5649 ntAPPRIS P2 TSL 5 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 INSR-201ENST00000302850 4721 ntAPPRIS P3 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 COPS9-201ENST00000307266 759 ntTSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 RHOG-202ENST00000396978 1066 ntAPPRIS P1 TSL 3 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 AC097641.1-201ENST00000580671 588 ntTSL 4 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 TREX1-205ENST00000625293 1783 ntBASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 GATM-201ENST00000396659 2597 ntAPPRIS P1 TSL 1 (best) BASIC20.2■□□□□ 0.82
FAM47DPA6NHR8 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 ATP6V0A2-201ENST00000330342 6542 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 KLHL31-202ENST00000407079 1905 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 UGDH-206ENST00000507089 1712 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 THAP7-AS1-203ENST00000452284 2298 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 BTBD9-205ENST00000419706 2034 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 FAM160A2-201ENST00000265978 3481 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 MZB1-201ENST00000302125 825 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 ZNF467-202ENST00000484747 913 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 EGFEM1P-209ENST00000502332 728 ntTSL 3 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 OPA3-203ENST00000544371 1146 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 ARMC4P1-202ENST00000576034 643 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 WT1-212ENST00000640146 1554 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 LTBP3-217ENST00000530785 2461 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 CXCR3-202ENST00000373693 1624 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 FLT1-207ENST00000615840 6453 ntTSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 LPCAT3-201ENST00000261407 2268 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 DBNL-207ENST00000440166 1415 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 FGFR2-208ENST00000360144 3001 ntTSL 2 BASIC20.19■□□□□ 0.82
FAM47DPA6NHR8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 AGFG2-201ENST00000300176 4796 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 PLLP-201ENST00000219207 1512 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 FOXD4-201ENST00000382500 1974 ntAPPRIS P1 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 SERF2-207ENST00000409614 582 ntTSL 2 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 RBCK1-213ENST00000475269 1200 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 GRB10-201ENST00000335866 5032 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 CDAN1-201ENST00000356231 4637 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 KRT8P36-201ENST00000489121 1440 ntBASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 TM7SF2-202ENST00000345348 1490 ntTSL 1 (best) BASIC20.18■□□□□ 0.82
FAM47DPA6NHR8 DIP2A-203ENST00000435722 2760 ntTSL 2 BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 DPP3P2-201ENST00000416030 1696 ntBASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 TLK2-202ENST00000343388 3227 ntAPPRIS ALT1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 ODF3B-201ENST00000329363 970 ntAPPRIS P1 TSL 5 BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 DKK3-203ENST00000525493 1326 ntTSL 2 BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 STX17-212ENST00000534052 2424 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC20.17■□□□□ 0.82
FAM47DPA6NHR8 CHRNB1-201ENST00000306071 2557 ntAPPRIS P1 TSL 1 (best) BASIC20.17■□□□□ 0.82
Retrieved 100 of 98,524 protein–RNA pairs in 22 ms