Protein–RNA interactions for Protein: A6NFC5

TMEM235, Transmembrane protein 235, humanhuman

Predictions only

Length 223 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM235A6NFC5 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 BAG3-201ENST00000369085 2571 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.25
TMEM235A6NFC5 AATK-203ENST00000417379 5081 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 TM4SF5-201ENST00000270560 708 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 SLC35A2-205ENST00000376529 865 ntTSL 3 BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 EXD3-208ENST00000479452 962 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 ADGRA3-202ENST00000334304 4566 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 ERLIN2-202ENST00000335171 1742 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 FAM69B-201ENST00000371691 2410 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 AKT1S1-207ENST00000391835 3075 ntTSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 AC018470.1-201ENST00000624790 3129 ntBASIC16.58■□□□□ 0.24
TMEM235A6NFC5 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 GLDN-201ENST00000335449 4971 ntAPPRIS P1 TSL 2 BASIC16.58■□□□□ 0.24
TMEM235A6NFC5 NUP153-202ENST00000537253 6030 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 ZDHHC23-201ENST00000330212 3778 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 AC141586.3-201ENST00000562166 1838 ntBASIC16.57■□□□□ 0.24
TMEM235A6NFC5 RHBDD3-201ENST00000216085 1794 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 SEPT7-206ENST00000435235 1584 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 BABAM1-208ENST00000598188 1470 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 MARC2-201ENST00000359316 1335 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 CEACAM4-201ENST00000221954 1205 ntAPPRIS P2 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 AC019068.1-201ENST00000415226 552 ntTSL 4 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 AC007322.4-201ENST00000509611 723 ntBASIC16.57■□□□□ 0.24
TMEM235A6NFC5 CEACAM4-203ENST00000600925 899 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 AC013268.1-206ENST00000638368 961 ntBASIC16.57■□□□□ 0.24
TMEM235A6NFC5 AC112229.1-201ENST00000639295 961 ntBASIC16.57■□□□□ 0.24
TMEM235A6NFC5 SLC37A2-203ENST00000403796 2910 ntAPPRIS ALT1 TSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 CHD1L-204ENST00000431239 2907 ntTSL 5 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 FAM213B-205ENST00000444521 2827 ntAPPRIS ALT2 TSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 SOGA3-203ENST00000525778 4077 ntAPPRIS P1 TSL 5 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 STMN3-202ENST00000540534 2351 ntTSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 SLC5A10-203ENST00000395645 2069 ntAPPRIS P1 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 KIFC3-201ENST00000379655 3427 ntAPPRIS P3 TSL 1 (best) BASIC16.57■□□□□ 0.24
TMEM235A6NFC5 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 SYBU-201ENST00000276646 2870 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 RALGAPA1-219ENST00000637992 8512 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 VMAC-201ENST00000339485 2254 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 CYC1-201ENST00000318911 1240 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 MLLT10-204ENST00000377091 905 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 NMRAL1-212ENST00000574425 1240 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 AC100791.3-201ENST00000617619 330 ntBASIC16.56■□□□□ 0.24
TMEM235A6NFC5 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 ZNF205-206ENST00000620094 2309 ntAPPRIS P1 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 NOS1AP-206ENST00000530878 2894 ntAPPRIS ALT2 TSL 1 (best) BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 ZNF668-208ENST00000538906 2865 ntAPPRIS P1 TSL 2 BASIC16.56■□□□□ 0.24
TMEM235A6NFC5 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 COPS7A-215ENST00000543155 2127 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 IGLON5-201ENST00000270642 2606 ntAPPRIS P1 TSL 5 BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 ATRIP-201ENST00000320211 2590 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 DPYSL3-202ENST00000398514 5309 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC16.55■□□□□ 0.24
TMEM235A6NFC5 GCK-205ENST00000437084 1385 ntTSL 5 BASIC16.55■□□□□ 0.24
Retrieved 100 of 98,524 protein–RNA pairs in 18.4 ms