Protein–RNA interactions for Protein: A0A0B4J249

TRAV5, T-cell receptor alpha variable 5 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV5A0A0B4J249 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 SORBS3-221ENST00000523965 2028 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 AC006333.2-201ENST00000607957 2099 ntBASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 PPM1D-204ENST00000629650 1525 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 GDF15-201ENST00000252809 1200 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 HACD1-201ENST00000326961 773 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 STX7-201ENST00000367937 1090 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 FEZ1-205ENST00000524435 750 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 DHRS4L2-204ENST00000537912 918 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 UBXN2B-206ENST00000638450 591 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 DCLK2-207ENST00000635524 2153 ntAPPRIS ALT2 TSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 RAB4A-205ENST00000618010 2799 ntTSL 3 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 ZDHHC2-201ENST00000262096 6377 ntAPPRIS P1 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 GABBR1-204ENST00000377016 4299 ntTSL 5 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 AC068338.2-201ENST00000563278 1430 ntBASIC15.09■□□□□ 0.01
TRAV5A0A0B4J249 WAC-205ENST00000375664 5924 ntTSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 ACAT1-201ENST00000265838 1761 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 ACBD4-202ENST00000376955 1453 ntTSL 2 BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 PLIN5-201ENST00000381848 2470 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 SCRIB-201ENST00000320476 5143 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 PGAM1-201ENST00000334828 1830 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 FBXO6-201ENST00000376753 1520 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC15.08■□□□□ 0.01
TRAV5A0A0B4J249 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 PALM3-201ENST00000340790 2262 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 LIN7B-201ENST00000221459 755 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 FBL-201ENST00000221801 1160 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 CENPVL3-201ENST00000417339 864 ntAPPRIS P1 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 LINC01956-201ENST00000557729 695 ntTSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 JOSD2-205ENST00000601423 802 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 CYP2T3P-201ENST00000601990 817 ntBASIC15.08■□□□□ 0
TRAV5A0A0B4J249 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 TEX21P-204ENST00000641479 1693 ntBASIC15.08■□□□□ 0
TRAV5A0A0B4J249 NUDT15-201ENST00000258662 2098 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 SLC9A6-201ENST00000370695 4725 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 ZNF274-212ENST00000617501 2538 ntAPPRIS P4 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 MCU-202ENST00000373053 2949 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 RNF139-201ENST00000303545 2637 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 C19orf67-203ENST00000548523 1427 ntAPPRIS P2 TSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 ENTPD5-206ENST00000556242 1437 ntTSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 AR-207ENST00000612010 3896 ntTSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 DLK1-202ENST00000341267 4722 ntAPPRIS P1 TSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 ABCC6-209ENST00000640696 1893 ntTSL 5 BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 PTPRJ-202ENST00000440289 3158 ntTSL 1 (best) BASIC15.08■□□□□ 0
TRAV5A0A0B4J249 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 AC009113.1-201ENST00000570267 2443 ntBASIC15.07■□□□□ 0
TRAV5A0A0B4J249 MCCC1-214ENST00000610757 2410 ntTSL 5 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 APLP2-210ENST00000528499 2530 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 CCKBR-203ENST00000525462 2138 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 TMEM8B-204ENST00000439587 2150 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 RAB28-203ENST00000338176 1787 ntTSL 3 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 LBX2-202ENST00000377566 1186 ntAPPRIS P1 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 MPRIP-203ENST00000395806 527 ntTSL 3 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 STAG3L3-201ENST00000423834 1262 ntTSL 2 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 LGR4-203ENST00000480977 492 ntTSL 2 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 COX4I1-216ENST00000568794 794 ntTSL 5 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 FAM222B-213ENST00000583522 556 ntTSL 2 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 BRWD1-AS2-201ENST00000603064 1028 ntBASIC15.07■□□□□ 0
TRAV5A0A0B4J249 USP49-202ENST00000373010 2446 ntTSL 5 BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC15.07■□□□□ 0
TRAV5A0A0B4J249 FAM57A-201ENST00000301324 2013 ntTSL 1 (best) BASIC15.07■□□□□ 0
Retrieved 100 of 98,524 protein–RNA pairs in 42.3 ms