Protein–RNA interactions for Protein: A0A0B4J235

TRAV13-2, T-cell receptor alpha variable 13-2 (Fragment), humanhuman

Predictions only

Length 113 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV13-2A0A0B4J235 CCNJ-202ENST00000403870 2830 ntTSL 5 BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 MANSC1-202ENST00000535902 5831 ntAPPRIS P1 TSL 1 (best) BASIC12.84□□□□□ -0.35
TRAV13-2A0A0B4J235 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC12.83□□□□□ -0.35
TRAV13-2A0A0B4J235 TINAGL1-202ENST00000457433 2140 ntAPPRIS ALT2 TSL 2 BASIC12.83□□□□□ -0.35
TRAV13-2A0A0B4J235 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC12.83□□□□□ -0.35
TRAV13-2A0A0B4J235 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC12.83□□□□□ -0.35
TRAV13-2A0A0B4J235 CORO6-210ENST00000580212 2345 ntTSL 5 BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 MRPS7-204ENST00000579761 1717 ntTSL 2 BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 NRXN1-204ENST00000401669 5870 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNRF1-205ENST00000566250 1069 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNRF1-206ENST00000567962 1234 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 AC011298.3-201ENST00000615796 283 ntBASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 AC120498.10-201ENST00000621827 505 ntBASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 ITSN1-209ENST00000399352 5408 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 PDP1-208ENST00000520728 2554 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 EFTUD1P1-204ENST00000560401 1798 ntBASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 GIGYF1-201ENST00000275732 6530 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 HMCES-203ENST00000417226 1490 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 STIM2-202ENST00000465503 3613 ntAPPRIS ALT2 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 SH3RF1-201ENST00000284637 5272 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 AL139099.2-201ENST00000555043 2469 ntTSL 2 BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 AL161938.1-201ENST00000569833 2180 ntBASIC12.83□□□□□ -0.36
TRAV13-2A0A0B4J235 BEGAIN-202ENST00000443071 2744 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 PAK4-201ENST00000321944 2555 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 CALM3-201ENST00000291295 2289 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 TRAF3-203ENST00000392745 2459 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 SLC5A10-204ENST00000395647 2140 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 COL18A1-203ENST00000359759 6586 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 KRT16P2-201ENST00000414673 1423 ntBASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 AC008969.1-201ENST00000550135 6438 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 PCNX2-201ENST00000258229 7518 ntAPPRIS P2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 MFSD10-206ENST00000508221 1639 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 NPTX2-201ENST00000265634 2700 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 NOP14-204ENST00000502735 2723 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 KRTAP17-1-201ENST00000334202 779 ntAPPRIS P1 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 MIR17HG-201ENST00000400282 931 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 ZEB1-AS1-201ENST00000423714 456 ntTSL 3 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 AC239859.2-201ENST00000444165 318 ntBASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 BEX2-204ENST00000536889 1077 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 NFATC4-203ENST00000422617 5491 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 NEUROD2-201ENST00000302584 2041 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 LRP1-204ENST00000553277 1693 ntTSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 MSLN-207ENST00000566549 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 FBXL18-205ENST00000620087 2076 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 DUOX1-202ENST00000389037 5483 ntAPPRIS P1 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 LRCH2-201ENST00000317135 4929 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 DDAH1-205ENST00000539042 1519 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 TTBK2-208ENST00000622375 6891 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 RAI1-207ENST00000640861 5172 ntTSL 5 BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 KDM1A-202ENST00000400181 3059 ntAPPRIS ALT2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 UBE2D2-202ENST00000398733 2702 ntAPPRIS P2 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 MAP6-201ENST00000304771 3334 ntAPPRIS P3 TSL 1 (best) BASIC12.82□□□□□ -0.36
TRAV13-2A0A0B4J235 MTFP1-201ENST00000266263 1370 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 VIPR1-201ENST00000325123 2773 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 KANK3-201ENST00000330915 2787 ntAPPRIS P2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 FMR1-AS1-202ENST00000596112 1845 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 TRIM33-202ENST00000369543 3457 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 MON2-213ENST00000552738 5543 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 SLC9A6-203ENST00000370701 4755 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 SHISA6-203ENST00000432116 7518 ntAPPRIS ALT2 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 AC005833.1-201ENST00000280684 4237 ntAPPRIS P1 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 AGAP1-IT1-201ENST00000440498 664 ntTSL 3 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNF696-205ENST00000521537 705 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 AP001107.5-202ENST00000533759 948 ntTSL 5 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 TSPAN11-202ENST00000535215 988 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 CCDC120-204ENST00000597275 2752 ntAPPRIS P3 TSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 ZMIZ1-201ENST00000334512 7546 ntAPPRIS P1 TSL 5 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 PAGR1-201ENST00000320330 1702 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 MAPKAP1-205ENST00000373503 3045 ntTSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 RAVER1-207ENST00000615032 1952 ntAPPRIS ALT2 TSL 5 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 KDF1-201ENST00000320567 1793 ntAPPRIS P1 TSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 ACVR1B-205ENST00000541224 1791 ntTSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 XKR8-201ENST00000373884 2692 ntAPPRIS P1 TSL 1 (best) BASIC12.81□□□□□ -0.36
TRAV13-2A0A0B4J235 TRPC1-201ENST00000273482 4324 ntAPPRIS P3 TSL 1 (best) BASIC12.81□□□□□ -0.36
Retrieved 100 of 98,524 protein–RNA pairs in 11.6 ms