Protein–RNA interactions for Protein: A0A0A6YYG3

TRBV6-8, T-cell receptor beta variable 6-8 (Fragment), humanhuman

Predictions only

Length 113 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV6-8A0A0A6YYG3 TMEM218-213ENST00000531909 1828 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 LINC01465-201ENST00000408887 1940 ntBASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EWSR1-208ENST00000414183 2189 ntAPPRIS P4 TSL 2 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HIC1-201ENST00000322941 3053 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DMWD-201ENST00000270223 3305 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PLEKHG5-212ENST00000537245 4794 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MAPK9-207ENST00000452135 4815 ntAPPRIS P5 TSL 5 BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ARL5A-201ENST00000295087 5326 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MAPK9-208ENST00000455781 4336 ntAPPRIS ALT1 TSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ITGBL1-202ENST00000376180 2494 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EDEM1-201ENST00000256497 6146 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ASMTL-201ENST00000381317 2027 ntAPPRIS P3 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ASMTL-202ENST00000381333 2035 ntAPPRIS ALT2 TSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC124283.5-201ENST00000624661 1809 ntBASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AP006587.1-201ENST00000534129 1502 ntBASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 RPS14-201ENST00000312037 711 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SBK2-201ENST00000344158 1056 ntAPPRIS P1 TSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HCFC1R1-202ENST00000354679 765 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SBK2-202ENST00000413299 1085 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 LINC01637-201ENST00000444039 684 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PACRGL-206ENST00000502374 1034 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC009065.4-203ENST00000562838 535 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PTGIR-202ENST00000594275 699 ntTSL 3 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PTGIR-206ENST00000598865 724 ntTSL 3 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 KCNH2-202ENST00000330883 3267 ntTSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CEP55-201ENST00000371485 2638 ntAPPRIS P1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PAFAH1B2-202ENST00000419197 2517 ntTSL 2 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SEPT11-201ENST00000264893 5593 ntAPPRIS P2 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EVL-202ENST00000402714 2353 ntAPPRIS ALT1 TSL 1 (best) BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 BCL2-203ENST00000589955 5011 ntBASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TNXA-203ENST00000507684 2038 ntBASIC13.51□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SMIM4-203ENST00000477703 1770 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 RAB11FIP2-201ENST00000355624 6061 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 DPF1-209ENST00000456296 1562 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CHST11-201ENST00000303694 5709 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ADORA2A-201ENST00000337539 2569 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NHLH2-201ENST00000320238 2512 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PSMD6-201ENST00000295901 1430 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PITX3-201ENST00000370002 1391 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PTOV1-AS1-201ENST00000596521 2155 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CAVIN3-201ENST00000303927 1174 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 XXYLT1-202ENST00000356740 564 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 EGFL7-203ENST00000371699 2125 ntAPPRIS P1 TSL 2 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MAP2K4P1-201ENST00000438453 1195 ntBASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC004889.1-203ENST00000464929 819 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 OR2A1-AS1-207ENST00000486094 819 ntBASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZNF696-204ENST00000520333 605 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PNMA6B-201ENST00000538162 1200 ntBASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TK2-208ENST00000545043 1120 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC010646.1-201ENST00000594059 515 ntAPPRIS P1 TSL 4 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 NR1H2-201ENST00000253727 1998 ntAPPRIS P2 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SCARF2-203ENST00000623402 3248 ntAPPRIS P3 TSL 1 (best) BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PRSS36-202ENST00000418068 2446 ntTSL 2 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 SLC6A7-203ENST00000524041 2431 ntTSL 5 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 PCDHGB3-202ENST00000618934 2445 ntAPPRIS P1 BASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 GOLGA6L3-201ENST00000507199 1679 ntBASIC13.5□□□□□ -0.25
TRBV6-8A0A0A6YYG3 WDR41-208ENST00000507029 1553 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TRPV3-209ENST00000576742 2766 ntAPPRIS P3 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 TSHZ3-201ENST00000240587 5176 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 RNF144A-201ENST00000320892 5743 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 RHBDL1-202ENST00000352681 1463 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC13.49□□□□□ -0.25
TRBV6-8A0A0A6YYG3 AC020763.4-201ENST00000623414 4170 ntBASIC13.49□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms