Protein–RNA interactions for Protein: Q9BXS0

COL25A1, Collagen alpha-1(XXV) chain, humanhuman

Predicted RBP Predictions only

Length 654 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL25A1Q9BXS0 RPL38P4-201ENST00000502376 214 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC006390.1-201ENST00000508068 283 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 RNU6-1143P-201ENST00000516125 104 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 MS4A4E-204ENST00000526086 460 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 MS4A4E-206ENST00000528394 555 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC005906.2-204ENST00000541095 481 ntTSL 3 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC026765.1-201ENST00000547876 435 ntTSL 3 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 HMGN2P6-201ENST00000551091 273 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC089998.2-201ENST00000551856 277 ntTSL 3 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AL445363.2-202ENST00000555361 435 ntTSL 3 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC018767.3-201ENST00000564185 481 ntTSL 3 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 RN7SL708P-201ENST00000580952 299 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC073254.1-207ENST00000600482 714 ntTSL 5 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AL512652.1-201ENST00000619006 500 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 RANBP3L-202ENST00000502994 2278 ntAPPRIS ALT1 TSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 DNAJC18-201ENST00000302060 5103 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AK9-201ENST00000285397 2566 ntTSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 GPNMB-201ENST00000258733 2862 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AC104066.2-201ENST00000564513 1741 ntTSL 3 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 LINC00517-202ENST00000554257 3460 ntTSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 ZNF268-213ENST00000542986 3773 ntTSL 5 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 ECT2-206ENST00000417960 4363 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 CEP44-206ENST00000503780 4534 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 ANKRD46-204ENST00000519597 2779 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 GOLGB1-209ENST00000614479 11115 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 ART4-201ENST00000228936 5129 ntAPPRIS P2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 DLG2-203ENST00000376104 5139 ntAPPRIS P3 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 AP001528.3-201ENST00000624364 3249 ntBASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 SPEF2-211ENST00000509059 4707 ntAPPRIS ALT2 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 XRCC4-205ENST00000511817 1636 ntAPPRIS P4 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 RNF217-202ENST00000368414 1771 ntTSL 2 BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 PDLIM5-221ENST00000542407 2979 ntAPPRIS ALT1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC6.72□□□□□ -1.33
COL25A1Q9BXS0 GABRQ-201ENST00000598523 6172 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 PTK2-207ENST00000517887 4661 ntTSL 5 BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 MASP1-205ENST00000392472 3900 ntTSL 1 (best) BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 CSDE1-214ENST00000530886 3459 ntTSL 5 BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 SRFBP1-201ENST00000339397 2855 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 PABPC1P6-201ENST00000445594 1829 ntBASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 CPEB2-AS1-202ENST00000501916 1806 ntTSL 2 BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 RAB5B-201ENST00000360299 5340 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 CACNA1D-224ENST00000637424 6856 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 KIAA1210-201ENST00000402510 7824 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 CASP1-215ENST00000533400 2001 ntAPPRIS P4 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 NBR1-201ENST00000341165 4656 ntAPPRIS P3 TSL 1 (best) BASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 LRRC37A17P-201ENST00000570311 4693 ntBASIC6.71□□□□□ -1.33
COL25A1Q9BXS0 KPNA6-201ENST00000373625 7378 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 LINC02535-201ENST00000455071 2513 ntTSL 2 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC107884.1-207ENST00000504206 4433 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 ATM-201ENST00000278616 13147 ntAPPRIS P1 TSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 SLC30A6-201ENST00000282587 5089 ntAPPRIS P1 TSL 1 (best) BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 CTNND1-216ENST00000527467 5071 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 CTNND1-229ENST00000531014 5053 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 NACAP2-201ENST00000318548 624 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 VTRNA3-1P-201ENST00000362552 102 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 MDM4-202ENST00000367180 547 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 SNORD115.1-201ENST00000391109 76 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 CD209-205ENST00000394161 507 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 FGFR1OP2P1-201ENST00000395943 500 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 GAPDHP42-201ENST00000406848 981 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 RPL23AP47-201ENST00000408017 460 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 MORN2-203ENST00000409131 544 ntTSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 RPL6P29-201ENST00000414863 865 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 LINC01359-201ENST00000415842 1157 ntTSL 2 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AL133268.2-201ENST00000416595 430 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC093155.2-201ENST00000420734 937 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 LINC01389-201ENST00000420876 483 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AL354714.4-201ENST00000427339 575 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC096644.2-201ENST00000429278 159 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 SKP1P3-201ENST00000429280 487 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC073909.1-201ENST00000447112 999 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 TPT1P13-201ENST00000449760 499 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 NPM1P39-201ENST00000449818 867 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC083806.1-201ENST00000468934 316 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC090589.1-201ENST00000473109 362 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC073522.1-201ENST00000483312 377 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC007686.1-201ENST00000488511 463 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 RN7SL346P-201ENST00000491561 294 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 MTCO1P29-201ENST00000496868 288 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC010260.1-201ENST00000511484 664 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC004054.1-201ENST00000515111 270 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AP000435.1-201ENST00000528539 496 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC013828.2-201ENST00000532487 235 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC011773.2-201ENST00000551479 285 ntTSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 ASXL1-208ENST00000555343 1034 ntTSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC004232.1-201ENST00000571388 208 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC005703.3-201ENST00000579159 373 ntTSL 3 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 TTN-AS1-217ENST00000585625 945 ntTSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC008966.2-201ENST00000606157 453 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AL022345.1-201ENST00000607292 135 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC078899.5-201ENST00000612475 178 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC024023.1-201ENST00000624530 922 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC005618.4-201ENST00000625053 554 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC099654.6-201ENST00000636487 512 ntBASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 AC005520.1-201ENST00000556551 3695 ntAPPRIS P1 TSL 2 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 NLRP5-203ENST00000621651 3885 ntAPPRIS ALT2 TSL 5 BASIC6.71□□□□□ -1.34
COL25A1Q9BXS0 SLC3A1-204ENST00000409380 2424 ntTSL 1 (best) BASIC6.71□□□□□ -1.34
Retrieved 100 of 98,524 protein–RNA pairs in 82.3 ms