RNA–Protein interactions for RNA: ENST00000449818.1

NPM1P39-201, Transcript of nucleophosmin 1 pseudogene 39, humanhuman

BASIC

Gene NPM1P39, Length 867 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPM1P39-201ENST00000449818 AEBP2Q6ZN18 517 aaPredicted RBP20.19■□□□□ 0.82
NPM1P39-201ENST00000449818 CHIC1Q5VXU3 224 aa18.78■□□□□ 0.6
NPM1P39-201ENST00000449818 SENP3Q9H4L4 574 aaPredicted RBP17.27■□□□□ 0.36
NPM1P39-201ENST00000449818 PHF23Q9BUL5 403 aaPredicted RBP16.98■□□□□ 0.31
NPM1P39-201ENST00000449818 FOXD1Q16676 465 aa16.21■□□□□ 0.19
NPM1P39-201ENST00000449818 POTEDQ86YR6 584 aa16.2■□□□□ 0.18
NPM1P39-201ENST00000449818 MSH5O43196 834 aa15.39■□□□□ 0.05
NPM1P39-201ENST00000449818 PLPPR3Q6T4P5 718 aa15.26■□□□□ 0.03
NPM1P39-201ENST00000449818 PIAS4Q8N2W9 510 aaPredicted RBP14.93□□□□□ -0.02
NPM1P39-201ENST00000449818 PPP6R1Q9UPN7 881 aa14.67□□□□□ -0.06
NPM1P39-201ENST00000449818 ADRA2BP18089 450 aa14.55□□□□□ -0.08
NPM1P39-201ENST00000449818 CACNB1Q02641 598 aaPredicted RBP13.61□□□□□ -0.23
NPM1P39-201ENST00000449818 DMRT2Q9Y5R5 561 aa13.61□□□□□ -0.23
NPM1P39-201ENST00000449818 MAPK8IP2Q13387 824 aaPredicted RBP13.59□□□□□ -0.23
NPM1P39-201ENST00000449818 KCNA4P22459 653 aa13.46□□□□□ -0.25
NPM1P39-201ENST00000449818 PPP4R3CPQ6ZMV5 832 aa13.45□□□□□ -0.26
NPM1P39-201ENST00000449818 SCAF1Q9H7N4 1312 aaKnown RBP13.28□□□□□ -0.28
NPM1P39-201ENST00000449818 NCBP3Q53F19 620 aaKnown RBP13.21□□□□□ -0.29
NPM1P39-201ENST00000449818 RNF39Q9H2S5 420 aa13.11□□□□□ -0.31
NPM1P39-201ENST00000449818 CNKSR2Q8WXI2 1034 aa13.04□□□□□ -0.32
NPM1P39-201ENST00000449818 DCAF8L1A6NGE4 600 aa13.01□□□□□ -0.33
NPM1P39-201ENST00000449818 NPM3O75607 178 aaKnown RBP13□□□□□ -0.33
NPM1P39-201ENST00000449818 SLC4A1APQ9BWU0 796 aaKnown RBP12.88□□□□□ -0.35
NPM1P39-201ENST00000449818 C1QBPQ07021 282 aaKnown RBP12.87□□□□□ -0.35
NPM1P39-201ENST00000449818 HOXD11P31277 338 aaPredicted RBP12.86□□□□□ -0.35
NPM1P39-201ENST00000449818 EHMT2Q96KQ7 1210 aa12.81□□□□□ -0.36
NPM1P39-201ENST00000449818 RNF216Q9NWF9 866 aaPredicted RBP12.72□□□□□ -0.37
NPM1P39-201ENST00000449818 DNAJC5BQ9UF47 199 aa12.67□□□□□ -0.38
NPM1P39-201ENST00000449818 POTEHQ6S545 545 aa12.55□□□□□ -0.4
NPM1P39-201ENST00000449818 CSRNP3Q8WYN3 585 aa12.55□□□□□ -0.4
NPM1P39-201ENST00000449818 ZBTB22O15209 634 aa12.4□□□□□ -0.42
NPM1P39-201ENST00000449818 FOXD4L1Q9NU39 408 aa12.34□□□□□ -0.43
NPM1P39-201ENST00000449818 SLC4A2P04920 1241 aa12.21□□□□□ -0.45
NPM1P39-201ENST00000449818 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.2□□□□□ -0.46
NPM1P39-201ENST00000449818 DSG3P32926 999 aa12.04□□□□□ -0.48
NPM1P39-201ENST00000449818 MYCNP04198 464 aaPredicted RBP12.03□□□□□ -0.48
NPM1P39-201ENST00000449818 SPINK5Q9NQ38 1064 aaPredicted RBP11.94□□□□□ -0.5
NPM1P39-201ENST00000449818 ATXN8OSP0DMR3 200 aa11.91□□□□□ -0.5
NPM1P39-201ENST00000449818 CAPN15O75808 1086 aa11.9□□□□□ -0.5
NPM1P39-201ENST00000449818 U3KPZ7 1027 aaPredicted RBP11.9□□□□□ -0.5
NPM1P39-201ENST00000449818 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
NPM1P39-201ENST00000449818 HNRNPUL2Q1KMD3 747 aaKnown RBP11.81□□□□□ -0.52
NPM1P39-201ENST00000449818 SAMD1Q6SPF0 538 aaPredicted RBP11.77□□□□□ -0.53
NPM1P39-201ENST00000449818 ATF5Q9Y2D1 282 aaPredicted RBP11.64□□□□□ -0.55
NPM1P39-201ENST00000449818 APLP2Q06481 763 aa11.62□□□□□ -0.55
NPM1P39-201ENST00000449818 ABCB7O75027 752 aa11.57□□□□□ -0.56
NPM1P39-201ENST00000449818 TRHP20396 242 aaPredicted RBP11.55□□□□□ -0.56
NPM1P39-201ENST00000449818 CHRDL2Q6WN34 429 aa11.5□□□□□ -0.57
NPM1P39-201ENST00000449818 ZNF219Q9P2Y4 722 aaPredicted RBP11.5□□□□□ -0.57
NPM1P39-201ENST00000449818 RBM42Q9BTD8 480 aaKnown RBP11.45□□□□□ -0.58
NPM1P39-201ENST00000449818 SP7Q8TDD2 431 aaPredicted RBP11.44□□□□□ -0.58
NPM1P39-201ENST00000449818 FKBP8Q14318 412 aa11.32□□□□□ -0.6
NPM1P39-201ENST00000449818 POLA2Q14181 598 aa11.22□□□□□ -0.61
NPM1P39-201ENST00000449818 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
NPM1P39-201ENST00000449818 FBLN2P98095 1184 aa11.16□□□□□ -0.62
NPM1P39-201ENST00000449818 ZBTB12Q9Y330 459 aaPredicted RBP11.13□□□□□ -0.63
NPM1P39-201ENST00000449818 PIP4P2Q8N4L2 257 aa11.09□□□□□ -0.63
NPM1P39-201ENST00000449818 AKT1S1Q96B36 256 aa11.08□□□□□ -0.64
NPM1P39-201ENST00000449818 SPDYE4A6NLX3 237 aa11.06□□□□□ -0.64
NPM1P39-201ENST00000449818 HAX1O00165 279 aa11.05□□□□□ -0.64
NPM1P39-201ENST00000449818 REM2Q8IYK8 340 aaPredicted RBP10.99□□□□□ -0.65
NPM1P39-201ENST00000449818 PROM2Q8N271 834 aa10.97□□□□□ -0.65
NPM1P39-201ENST00000449818 FXR2P51116 673 aaKnown RBP eCLIP10.94□□□□□ -0.66
NPM1P39-201ENST00000449818 EVX2Q03828 476 aa10.93□□□□□ -0.66
NPM1P39-201ENST00000449818 FBXO3Q9UK99 471 aa10.88□□□□□ -0.67
NPM1P39-201ENST00000449818 PITPNM1O00562 1244 aa10.87□□□□□ -0.67
NPM1P39-201ENST00000449818 AMER1Q5JTC6 1135 aaPredicted RBP10.86□□□□□ -0.67
NPM1P39-201ENST00000449818 OSCARQ8IYS5 282 aa10.85□□□□□ -0.67
NPM1P39-201ENST00000449818 SPDYE2BA6NHP3 402 aa10.83□□□□□ -0.68
NPM1P39-201ENST00000449818 SPDYE6P0CI01 402 aa10.83□□□□□ -0.68
NPM1P39-201ENST00000449818 SPDYE2Q495Y8 402 aa10.83□□□□□ -0.68
NPM1P39-201ENST00000449818 SLC24A1O60721 1099 aa10.8□□□□□ -0.68
NPM1P39-201ENST00000449818 ZNF692Q9BU19 519 aaPredicted RBP10.79□□□□□ -0.68
NPM1P39-201ENST00000449818 RTN4Q9NQC3 1192 aaKnown RBP10.79□□□□□ -0.68
NPM1P39-201ENST00000449818 SSUH2Q9Y2M2 353 aa10.79□□□□□ -0.68
NPM1P39-201ENST00000449818 LHX8Q68G74 356 aa10.72□□□□□ -0.69
NPM1P39-201ENST00000449818 VASPP50552 380 aaPredicted RBP10.71□□□□□ -0.69
NPM1P39-201ENST00000449818 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
NPM1P39-201ENST00000449818 C19orf67A6NJJ6 358 aa10.61□□□□□ -0.71
NPM1P39-201ENST00000449818 GABBR2O75899 941 aa10.61□□□□□ -0.71
NPM1P39-201ENST00000449818 STAG3Q9UJ98 1225 aa10.61□□□□□ -0.71
NPM1P39-201ENST00000449818 PRKAR2AP13861 404 aaKnown RBP10.57□□□□□ -0.72
NPM1P39-201ENST00000449818 IFNLR1Q8IU57 520 aaPredicted RBP10.57□□□□□ -0.72
NPM1P39-201ENST00000449818 PLSCR2Q9NRY7 297 aa10.55□□□□□ -0.72
NPM1P39-201ENST00000449818 PLCD3Q8N3E9 789 aa10.45□□□□□ -0.74
NPM1P39-201ENST00000449818 SPDYE1Q8NFV5 336 aaPredicted RBP10.43□□□□□ -0.74
NPM1P39-201ENST00000449818 MIER1Q8N108 512 aa10.42□□□□□ -0.74
NPM1P39-201ENST00000449818 KLHL34Q8N239 644 aa10.42□□□□□ -0.74
NPM1P39-201ENST00000449818 POTEIP0CG38 1075 aa10.41□□□□□ -0.74
NPM1P39-201ENST00000449818 SPOCK2Q92563 424 aa10.41□□□□□ -0.74
NPM1P39-201ENST00000449818 CLEC11AQ9Y240 323 aa10.41□□□□□ -0.74
NPM1P39-201ENST00000449818 PLEKHG5O94827 1062 aa10.39□□□□□ -0.75
NPM1P39-201ENST00000449818 ZBTB47Q9UFB7 747 aaPredicted RBP10.37□□□□□ -0.75
NPM1P39-201ENST00000449818 PKD2Q13563 968 aa10.33□□□□□ -0.76
NPM1P39-201ENST00000449818 CHADLQ6NUI6 762 aa10.31□□□□□ -0.76
NPM1P39-201ENST00000449818 PRR29P0C7W0 189 aa10.29□□□□□ -0.76
NPM1P39-201ENST00000449818 CREBZFQ9NS37 354 aa10.24□□□□□ -0.77
NPM1P39-201ENST00000449818 ECM2O94769 699 aaPredicted RBP10.21□□□□□ -0.77
NPM1P39-201ENST00000449818 CLCN6P51797 869 aa10.2□□□□□ -0.78
NPM1P39-201ENST00000449818 CD44P16070 742 aaKnown RBP10.18□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms