RNA–Protein interactions for RNA: ENST00000409380.5

SLC3A1-204, Transcript of solute carrier family 3 member 1, humanhuman

TSL 1 (best) BASIC

Gene SLC3A1, Length 2,424 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLC3A1-204ENST00000409380 NISCHQ9Y2I1 1504 aa15.48■□□□□ 0.07
SLC3A1-204ENST00000409380 SLC24A1O60721 1099 aa14.2□□□□□ -0.14
SLC3A1-204ENST00000409380 MYT1Q01538 1121 aa14.01□□□□□ -0.17
SLC3A1-204ENST00000409380 PELP1Q8IZL8 1130 aaKnown RBP14□□□□□ -0.17
SLC3A1-204ENST00000409380 TTBK1Q5TCY1 1321 aaPredicted RBP13.69□□□□□ -0.22
SLC3A1-204ENST00000409380 CCDC180Q9P1Z9 1646 aa13.5□□□□□ -0.25
SLC3A1-204ENST00000409380 DAXXQ9UER7 740 aaPredicted RBP13.26□□□□□ -0.29
SLC3A1-204ENST00000409380 APLP2Q06481 763 aa13.2□□□□□ -0.3
SLC3A1-204ENST00000409380 PRKCSHP14314 528 aaPredicted RBP13.19□□□□□ -0.3
SLC3A1-204ENST00000409380 ERICH6Q7L0X2 663 aa13.09□□□□□ -0.31
SLC3A1-204ENST00000409380 ZCCHC6Q5VYS8 1495 aaKnown RBP13.02□□□□□ -0.33
SLC3A1-204ENST00000409380 CHIC1Q5VXU3 224 aa13□□□□□ -0.33
SLC3A1-204ENST00000409380 DCAF1Q9Y4B6 1507 aa12.82□□□□□ -0.36
SLC3A1-204ENST00000409380 DCAF8L2P0C7V8 631 aa12.78□□□□□ -0.36
SLC3A1-204ENST00000409380 ABCC9O60706 1549 aa12.66□□□□□ -0.38
SLC3A1-204ENST00000409380 SHROOM4Q9ULL8 1493 aa12.66□□□□□ -0.38
SLC3A1-204ENST00000409380 MYO15BQ96JP2 1530 aa12.65□□□□□ -0.38
SLC3A1-204ENST00000409380 NCBP3Q53F19 620 aaKnown RBP12.64□□□□□ -0.39
SLC3A1-204ENST00000409380 NACADO15069 1562 aa12.55□□□□□ -0.4
SLC3A1-204ENST00000409380 RB1CC1Q8TDY2 1594 aa12.43□□□□□ -0.42
SLC3A1-204ENST00000409380 BCL11AQ9H165 835 aa12.4□□□□□ -0.42
SLC3A1-204ENST00000409380 SCRIBQ14160 1630 aa12.39□□□□□ -0.43
SLC3A1-204ENST00000409380 EHMT2Q96KQ7 1210 aa12.36□□□□□ -0.43
SLC3A1-204ENST00000409380 RTN4Q9NQC3 1192 aaKnown RBP12.36□□□□□ -0.43
SLC3A1-204ENST00000409380 PLPPR3Q6T4P5 718 aa12.35□□□□□ -0.43
SLC3A1-204ENST00000409380 EIF5BO60841 1220 aaKnown RBP12.32□□□□□ -0.44
SLC3A1-204ENST00000409380 ARXQ96QS3 562 aa12.31□□□□□ -0.44
SLC3A1-204ENST00000409380 AEBP2Q6ZN18 517 aaPredicted RBP12.3□□□□□ -0.44
SLC3A1-204ENST00000409380 SUPT5HO00267 1087 aaKnown RBP12.23□□□□□ -0.45
SLC3A1-204ENST00000409380 FAM9AQ8IZU1 332 aaPredicted RBP12.16□□□□□ -0.46
SLC3A1-204ENST00000409380 UNC13AQ9UPW8 1703 aa12.15□□□□□ -0.46
SLC3A1-204ENST00000409380 HRCP23327 699 aa12.12□□□□□ -0.47
SLC3A1-204ENST00000409380 RANGAP1P46060 587 aaPredicted RBP12.07□□□□□ -0.48
SLC3A1-204ENST00000409380 AMER1Q5JTC6 1135 aaPredicted RBP12.04□□□□□ -0.48
SLC3A1-204ENST00000409380 TIMELESSQ9UNS1 1208 aa12.04□□□□□ -0.48
SLC3A1-204ENST00000409380 SCAF1Q9H7N4 1312 aaKnown RBP12.03□□□□□ -0.48
SLC3A1-204ENST00000409380 RSF1Q96T23 1441 aaPredicted RBP12.02□□□□□ -0.48
SLC3A1-204ENST00000409380 BICRAQ9NZM4 1560 aa12.01□□□□□ -0.49
SLC3A1-204ENST00000409380 CECR2Q9BXF3 1484 aa12□□□□□ -0.49
SLC3A1-204ENST00000409380 BAZ1AQ9NRL2 1556 aaPredicted RBP11.97□□□□□ -0.49
SLC3A1-204ENST00000409380 PABPN1Q86U42 306 aaKnown RBP eCLIP11.97□□□□□ -0.49
SLC3A1-204ENST00000409380 MROH2BQ7Z745 1585 aa11.95□□□□□ -0.5
SLC3A1-204ENST00000409380 CENPBP07199 599 aaPredicted RBP11.91□□□□□ -0.5
SLC3A1-204ENST00000409380 KLHL34Q8N239 644 aa11.91□□□□□ -0.5
SLC3A1-204ENST00000409380 PLEKHG5O94827 1062 aa11.9□□□□□ -0.5
SLC3A1-204ENST00000409380 DNAJC5BQ9UF47 199 aa11.89□□□□□ -0.51
SLC3A1-204ENST00000409380 SMARCA4P51532 1647 aa11.89□□□□□ -0.51
SLC3A1-204ENST00000409380 WIZO95785 1651 aa11.86□□□□□ -0.51
SLC3A1-204ENST00000409380 HOMEZQ8IX15 550 aa11.85□□□□□ -0.51
SLC3A1-204ENST00000409380 TULP1O00294 542 aaPredicted RBP11.78□□□□□ -0.52
SLC3A1-204ENST00000409380 PHF23Q9BUL5 403 aaPredicted RBP11.77□□□□□ -0.53
SLC3A1-204ENST00000409380 TOP2AP11388 1531 aaKnown RBP11.76□□□□□ -0.53
SLC3A1-204ENST00000409380 PEG3Q9GZU2 1588 aa11.74□□□□□ -0.53
SLC3A1-204ENST00000409380 UBE2Q2Q8WVN8 375 aa11.74□□□□□ -0.53
SLC3A1-204ENST00000409380 SMARCA2P51531 1590 aa11.7□□□□□ -0.54
SLC3A1-204ENST00000409380 ATAD2BQ9ULI0 1458 aa11.67□□□□□ -0.54
SLC3A1-204ENST00000409380 PODXL2Q9NZ53 605 aa11.67□□□□□ -0.54
SLC3A1-204ENST00000409380 EIF4G1Q04637 1599 aaKnown RBP11.66□□□□□ -0.54
SLC3A1-204ENST00000409380 KCNA4P22459 653 aa11.66□□□□□ -0.54
SLC3A1-204ENST00000409380 TAOK2Q9UL54 1235 aa11.64□□□□□ -0.55
SLC3A1-204ENST00000409380 CCDC88BA6NC98 1476 aa11.63□□□□□ -0.55
SLC3A1-204ENST00000409380 BAZ1BQ9UIG0 1483 aaKnown RBP11.63□□□□□ -0.55
SLC3A1-204ENST00000409380 ANP32EQ9BTT0 268 aa11.61□□□□□ -0.55
SLC3A1-204ENST00000409380 NCAPD3P42695 1498 aa11.57□□□□□ -0.56
SLC3A1-204ENST00000409380 HMGXB3Q12766 1538 aa11.57□□□□□ -0.56
SLC3A1-204ENST00000409380 TRIM41Q8WV44 630 aa11.52□□□□□ -0.57
SLC3A1-204ENST00000409380 ACIN1Q9UKV3 1341 aaKnown RBP11.47□□□□□ -0.57
SLC3A1-204ENST00000409380 CC2D2AQ9P2K1 1620 aa11.47□□□□□ -0.57
SLC3A1-204ENST00000409380 NPM2Q86SE8 214 aaKnown RBP11.45□□□□□ -0.58
SLC3A1-204ENST00000409380 PDIA4P13667 645 aaKnown RBP11.43□□□□□ -0.58
SLC3A1-204ENST00000409380 CSRNP3Q8WYN3 585 aa11.42□□□□□ -0.58
SLC3A1-204ENST00000409380 BCANQ96GW7 911 aa11.41□□□□□ -0.58
SLC3A1-204ENST00000409380 PKNOX2Q96KN3 472 aa11.4□□□□□ -0.58
SLC3A1-204ENST00000409380 TPRNQ4KMQ1 711 aa11.39□□□□□ -0.59
SLC3A1-204ENST00000409380 PPARGC1BQ86YN6 1023 aaKnown RBP11.39□□□□□ -0.59
SLC3A1-204ENST00000409380 ABCC8Q09428 1581 aa11.39□□□□□ -0.59
SLC3A1-204ENST00000409380 DNAJC5Q9H3Z4 198 aa11.39□□□□□ -0.59
SLC3A1-204ENST00000409380 GTF3C3Q9Y5Q9 886 aa11.36□□□□□ -0.59
SLC3A1-204ENST00000409380 WRNQ14191 1432 aaPredicted RBP eCLIP11.34□□□□□ -0.59
SLC3A1-204ENST00000409380 ANO8Q9HCE9 1232 aaPredicted RBP11.33□□□□□ -0.6
SLC3A1-204ENST00000409380 CFTRP13569 1480 aa11.33□□□□□ -0.6
SLC3A1-204ENST00000409380 PRDM2Q13029 1718 aa11.3□□□□□ -0.6
SLC3A1-204ENST00000409380 FBXO3Q9UK99 471 aa11.3□□□□□ -0.6
SLC3A1-204ENST00000409380 NEFLP07196 543 aa11.3□□□□□ -0.6
SLC3A1-204ENST00000409380 C14orf37Q86TY3 774 aa11.29□□□□□ -0.6
SLC3A1-204ENST00000409380 CADPSQ9ULU8 1353 aa11.28□□□□□ -0.6
SLC3A1-204ENST00000409380 LOC105371045A0A1W2PR82 267 aa11.28□□□□□ -0.6
SLC3A1-204ENST00000409380 PDE4CQ08493 712 aa11.27□□□□□ -0.61
SLC3A1-204ENST00000409380 SYNJ1O43426 1573 aa11.26□□□□□ -0.61
SLC3A1-204ENST00000409380 EEA1Q15075 1411 aa11.25□□□□□ -0.61
SLC3A1-204ENST00000409380 ZEB1P37275 1124 aaPredicted RBP11.25□□□□□ -0.61
SLC3A1-204ENST00000409380 ERICH6BQ5W0A0 696 aa11.25□□□□□ -0.61
SLC3A1-204ENST00000409380 TOP2BQ02880 1626 aa11.24□□□□□ -0.61
SLC3A1-204ENST00000409380 BIVM-ERCC5R4GMW8 1640 aa11.23□□□□□ -0.61
SLC3A1-204ENST00000409380 NEUROD1Q13562 356 aa11.2□□□□□ -0.62
SLC3A1-204ENST00000409380 SOGA1O94964 1423 aa11.19□□□□□ -0.62
SLC3A1-204ENST00000409380 LAMC3Q9Y6N6 1575 aa11.18□□□□□ -0.62
SLC3A1-204ENST00000409380 CUX1P39880 1505 aa11.17□□□□□ -0.62
SLC3A1-204ENST00000409380 FANCD2Q9BXW9 1451 aa11.15□□□□□ -0.62
SLC3A1-204ENST00000409380 CHMP4AQ9BY43 222 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 13.6 ms