RNA–Protein interactions for RNA: ENST00000429280.1

SKP1P3-201, Transcript of S-phase kinase associated protein 1 pseudogene 3, humanhuman

BASIC

Gene SKP1P3, Length 487 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SKP1P3-201ENST00000429280 AEBP2Q6ZN18 517 aaPredicted RBP18.59■□□□□ 0.57
SKP1P3-201ENST00000429280 CHIC1Q5VXU3 224 aa18.54■□□□□ 0.56
SKP1P3-201ENST00000429280 PHF23Q9BUL5 403 aaPredicted RBP16.34■□□□□ 0.21
SKP1P3-201ENST00000429280 SENP3Q9H4L4 574 aaPredicted RBP15.73■□□□□ 0.11
SKP1P3-201ENST00000429280 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
SKP1P3-201ENST00000429280 FOXD1Q16676 465 aa14.55□□□□□ -0.08
SKP1P3-201ENST00000429280 ADRA2BP18089 450 aa14.3□□□□□ -0.12
SKP1P3-201ENST00000429280 PPP6R1Q9UPN7 881 aa14.3□□□□□ -0.12
SKP1P3-201ENST00000429280 PIAS4Q8N2W9 510 aaPredicted RBP13.8□□□□□ -0.2
SKP1P3-201ENST00000429280 KCNA4P22459 653 aa13.55□□□□□ -0.24
SKP1P3-201ENST00000429280 PPP4R3CPQ6ZMV5 832 aa13.46□□□□□ -0.25
SKP1P3-201ENST00000429280 MSH5O43196 834 aa13.28□□□□□ -0.28
SKP1P3-201ENST00000429280 NCBP3Q53F19 620 aaKnown RBP13.22□□□□□ -0.29
SKP1P3-201ENST00000429280 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
SKP1P3-201ENST00000429280 NPM3O75607 178 aaKnown RBP13.01□□□□□ -0.33
SKP1P3-201ENST00000429280 EHMT2Q96KQ7 1210 aa13.01□□□□□ -0.33
SKP1P3-201ENST00000429280 CNKSR2Q8WXI2 1034 aa13□□□□□ -0.33
SKP1P3-201ENST00000429280 SLC4A1APQ9BWU0 796 aaKnown RBP12.98□□□□□ -0.33
SKP1P3-201ENST00000429280 MAPK8IP2Q13387 824 aaPredicted RBP12.86□□□□□ -0.35
SKP1P3-201ENST00000429280 CSRNP3Q8WYN3 585 aa12.72□□□□□ -0.37
SKP1P3-201ENST00000429280 RNF216Q9NWF9 866 aaPredicted RBP12.66□□□□□ -0.38
SKP1P3-201ENST00000429280 DNAJC5BQ9UF47 199 aa12.61□□□□□ -0.39
SKP1P3-201ENST00000429280 DMRT2Q9Y5R5 561 aa12.61□□□□□ -0.39
SKP1P3-201ENST00000429280 HOXD11P31277 338 aaPredicted RBP12.51□□□□□ -0.41
SKP1P3-201ENST00000429280 ZBTB22O15209 634 aa12.47□□□□□ -0.41
SKP1P3-201ENST00000429280 FOXD4L1Q9NU39 408 aa12.37□□□□□ -0.43
SKP1P3-201ENST00000429280 SLC4A2P04920 1241 aa12.19□□□□□ -0.46
SKP1P3-201ENST00000429280 POTEDQ86YR6 584 aa12.04□□□□□ -0.48
SKP1P3-201ENST00000429280 DCAF8L1A6NGE4 600 aa12.03□□□□□ -0.48
SKP1P3-201ENST00000429280 MYCNP04198 464 aaPredicted RBP12.02□□□□□ -0.49
SKP1P3-201ENST00000429280 ATXN8OSP0DMR3 200 aa11.93□□□□□ -0.5
SKP1P3-201ENST00000429280 GRWD1Q9BQ67 446 aaKnown RBP eCLIP11.91□□□□□ -0.5
SKP1P3-201ENST00000429280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.75□□□□□ -0.53
SKP1P3-201ENST00000429280 HNRNPUL2Q1KMD3 747 aaKnown RBP11.75□□□□□ -0.53
SKP1P3-201ENST00000429280 U3KPZ7 1027 aaPredicted RBP11.75□□□□□ -0.53
SKP1P3-201ENST00000429280 SAMD1Q6SPF0 538 aaPredicted RBP11.72□□□□□ -0.53
SKP1P3-201ENST00000429280 ATF5Q9Y2D1 282 aaPredicted RBP11.66□□□□□ -0.54
SKP1P3-201ENST00000429280 APLP2Q06481 763 aa11.54□□□□□ -0.56
SKP1P3-201ENST00000429280 FKBP8Q14318 412 aa11.47□□□□□ -0.57
SKP1P3-201ENST00000429280 ZNF219Q9P2Y4 722 aaPredicted RBP11.45□□□□□ -0.58
SKP1P3-201ENST00000429280 RNF39Q9H2S5 420 aa11.41□□□□□ -0.58
SKP1P3-201ENST00000429280 C1QBPQ07021 282 aaKnown RBP11.31□□□□□ -0.6
SKP1P3-201ENST00000429280 SPINK5Q9NQ38 1064 aaPredicted RBP11.31□□□□□ -0.6
SKP1P3-201ENST00000429280 TRHP20396 242 aaPredicted RBP11.29□□□□□ -0.6
SKP1P3-201ENST00000429280 CAPN15O75808 1086 aa11.25□□□□□ -0.61
SKP1P3-201ENST00000429280 POLA2Q14181 598 aa11.2□□□□□ -0.62
SKP1P3-201ENST00000429280 MKRN4PQ13434 485 aaPredicted RBP11.17□□□□□ -0.62
SKP1P3-201ENST00000429280 FBLN2P98095 1184 aa11.16□□□□□ -0.62
SKP1P3-201ENST00000429280 SPDYE4A6NLX3 237 aa11.11□□□□□ -0.63
SKP1P3-201ENST00000429280 AMER1Q5JTC6 1135 aaPredicted RBP11.11□□□□□ -0.63
SKP1P3-201ENST00000429280 RTN4Q9NQC3 1192 aaKnown RBP11.07□□□□□ -0.64
SKP1P3-201ENST00000429280 ABCB7O75027 752 aa11.05□□□□□ -0.64
SKP1P3-201ENST00000429280 ZBTB12Q9Y330 459 aaPredicted RBP11.05□□□□□ -0.64
SKP1P3-201ENST00000429280 DSG3P32926 999 aa10.99□□□□□ -0.65
SKP1P3-201ENST00000429280 PROM2Q8N271 834 aa10.99□□□□□ -0.65
SKP1P3-201ENST00000429280 FBXO3Q9UK99 471 aa10.98□□□□□ -0.65
SKP1P3-201ENST00000429280 CACNB1Q02641 598 aaPredicted RBP10.84□□□□□ -0.67
SKP1P3-201ENST00000429280 ZNF692Q9BU19 519 aaPredicted RBP10.8□□□□□ -0.68
SKP1P3-201ENST00000429280 VASPP50552 380 aaPredicted RBP10.79□□□□□ -0.68
SKP1P3-201ENST00000429280 SPDYE2BA6NHP3 402 aa10.78□□□□□ -0.68
SKP1P3-201ENST00000429280 SPDYE6P0CI01 402 aa10.78□□□□□ -0.68
SKP1P3-201ENST00000429280 SPDYE2Q495Y8 402 aa10.78□□□□□ -0.68
SKP1P3-201ENST00000429280 OSCARQ8IYS5 282 aa10.78□□□□□ -0.68
SKP1P3-201ENST00000429280 SSUH2Q9Y2M2 353 aa10.73□□□□□ -0.69
SKP1P3-201ENST00000429280 IFNLR1Q8IU57 520 aaPredicted RBP10.69□□□□□ -0.7
SKP1P3-201ENST00000429280 PABPN1Q86U42 306 aaKnown RBP eCLIP10.66□□□□□ -0.7
SKP1P3-201ENST00000429280 STAG3Q9UJ98 1225 aa10.65□□□□□ -0.7
SKP1P3-201ENST00000429280 SLC24A1O60721 1099 aa10.62□□□□□ -0.71
SKP1P3-201ENST00000429280 KLHL34Q8N239 644 aa10.54□□□□□ -0.72
SKP1P3-201ENST00000429280 PLCD3Q8N3E9 789 aa10.52□□□□□ -0.73
SKP1P3-201ENST00000429280 MIER1Q8N108 512 aa10.5□□□□□ -0.73
SKP1P3-201ENST00000429280 SPOCK2Q92563 424 aa10.5□□□□□ -0.73
SKP1P3-201ENST00000429280 PKD2Q13563 968 aa10.47□□□□□ -0.73
SKP1P3-201ENST00000429280 RBM42Q9BTD8 480 aaKnown RBP10.46□□□□□ -0.73
SKP1P3-201ENST00000429280 PLEKHG5O94827 1062 aa10.43□□□□□ -0.74
SKP1P3-201ENST00000429280 AKT1S1Q96B36 256 aa10.42□□□□□ -0.74
SKP1P3-201ENST00000429280 ZBTB47Q9UFB7 747 aaPredicted RBP10.4□□□□□ -0.74
SKP1P3-201ENST00000429280 SPDYE1Q8NFV5 336 aaPredicted RBP10.37□□□□□ -0.75
SKP1P3-201ENST00000429280 DCAF8L2P0C7V8 631 aa10.36□□□□□ -0.75
SKP1P3-201ENST00000429280 ECM2O94769 699 aaPredicted RBP10.34□□□□□ -0.75
SKP1P3-201ENST00000429280 REM2Q8IYK8 340 aaPredicted RBP10.31□□□□□ -0.76
SKP1P3-201ENST00000429280 CLEC11AQ9Y240 323 aa10.3□□□□□ -0.76
SKP1P3-201ENST00000429280 PRR29P0C7W0 189 aa10.27□□□□□ -0.77
SKP1P3-201ENST00000429280 CIZ1Q9ULV3 898 aaPredicted RBP10.27□□□□□ -0.77
SKP1P3-201ENST00000429280 PLCB2Q00722 1185 aa10.26□□□□□ -0.77
SKP1P3-201ENST00000429280 RGL2O15211 777 aa10.22□□□□□ -0.77
SKP1P3-201ENST00000429280 CREBZFQ9NS37 354 aa10.22□□□□□ -0.77
SKP1P3-201ENST00000429280 TRIM41Q8WV44 630 aa10.21□□□□□ -0.77
SKP1P3-201ENST00000429280 NUBP1P53384 320 aa10.19□□□□□ -0.78
SKP1P3-201ENST00000429280 GSE1Q14687 1217 aa10.19□□□□□ -0.78
SKP1P3-201ENST00000429280 PITPNM1O00562 1244 aa10.17□□□□□ -0.78
SKP1P3-201ENST00000429280 MNX1P50219 401 aaPredicted RBP10.17□□□□□ -0.78
SKP1P3-201ENST00000429280 BBXQ8WY36 941 aaPredicted RBP10.16□□□□□ -0.78
SKP1P3-201ENST00000429280 NPM1P06748 294 aaKnown RBP eCLIP10.15□□□□□ -0.78
SKP1P3-201ENST00000429280 DCAF8Q5TAQ9 597 aa10.14□□□□□ -0.79
SKP1P3-201ENST00000429280 ZBTB4Q9P1Z0 1013 aaPredicted RBP10.13□□□□□ -0.79
SKP1P3-201ENST00000429280 HAP1P54257 671 aaPredicted RBP10.11□□□□□ -0.79
SKP1P3-201ENST00000429280 FAM212AQ96EL1 285 aa10.09□□□□□ -0.79
SKP1P3-201ENST00000429280 CHGAP10645 457 aaKnown RBP10.07□□□□□ -0.8
SKP1P3-201ENST00000429280 PAXIP1Q6ZW49 1069 aaPredicted RBP10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 115.5 ms