Protein–RNA interactions for Protein: Q9BYQ8

KRTAP4-9, Keratin-associated protein 4-9, humanhuman

Predictions only

Length 210 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP4-9Q9BYQ8 FAM197Y4-201ENST00000616275 467 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 MIR548AY-201ENST00000617669 107 ntBASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 FAM197Y5-203ENST00000619815 467 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AL355987.5-201ENST00000621585 411 ntBASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC129908.1-201ENST00000624553 648 ntBASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ENSA-215ENST00000638926 360 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNF43-203ENST00000577716 4367 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 FAM107A-201ENST00000360997 3367 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 PHKA1-203ENST00000373542 6020 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 THOC5-204ENST00000397873 2374 ntAPPRIS P1 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 TUBB-208ENST00000396389 2903 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 TOGARAM1-202ENST00000361577 6247 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ASPN-202ENST00000375544 2470 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 BBS10-201ENST00000393262 3595 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 CLEC12B-202ENST00000396502 3029 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 TXNL4B-202ENST00000423037 2490 ntAPPRIS P1 TSL 4 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF619-202ENST00000429348 4104 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF415-207ENST00000595193 2479 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 KNOP1-201ENST00000219837 6432 ntAPPRIS P2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 PAMR1-207ENST00000619888 3142 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 YPEL5-203ENST00000379520 2560 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 TPCN1-202ENST00000392569 2558 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 SLC38A1-210ENST00000552197 2599 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC006213.1-201ENST00000586860 2550 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 PTPRR-202ENST00000342084 2037 ntAPPRIS ALT2 TSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 FOXJ2-202ENST00000428177 2676 ntAPPRIS ALT2 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC090983.1-201ENST00000623426 3897 ntBASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ATG16L1-204ENST00000392018 3313 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF765-206ENST00000594030 7588 ntTSL 4 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 LCLAT1-202ENST00000319406 2774 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 NBR1-206ENST00000590996 3446 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 FAM111B-206ENST00000620384 3405 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 TTC12-210ENST00000483239 2240 ntAPPRIS ALT2 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 HLA-V-203ENST00000457107 4814 ntBASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AL133412.1-201ENST00000380194 2992 ntBASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 LRRTM4-205ENST00000409911 2976 ntAPPRIS ALT1 TSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 TTC39C-201ENST00000304621 2304 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AP3M1-202ENST00000372745 2320 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC018512.1-201ENST00000417761 2326 ntAPPRIS P1 TSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ERLIN2-211ENST00000523887 2347 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 PSG6-209ENST00000601833 2321 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 C6orf222-201ENST00000437635 3736 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF223-201ENST00000434772 2418 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNF31-211ENST00000559275 3198 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 RNF213-201ENST00000319921 5316 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 GDA-202ENST00000358399 5340 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 SCMH1-207ENST00000372597 3252 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 RAB18-201ENST00000356940 4886 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 OGDHL-203ENST00000432695 3383 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 MIR100HG-212ENST00000531381 3370 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AL132796.2-201ENST00000554025 1851 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF423-202ENST00000535559 4201 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 RND3-201ENST00000263895 2711 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 P4HA1-202ENST00000307116 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 RAD52-202ENST00000358495 2710 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 P4HA1-203ENST00000373008 2727 ntAPPRIS ALT1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 AL023806.3-201ENST00000638502 2704 ntBASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 PCNX2-205ENST00000430153 1982 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZSCAN26-207ENST00000623276 1998 ntAPPRIS P2 TSL 3 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 TXLNG-201ENST00000380122 4401 ntAPPRIS P3 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 CTSC-203ENST00000524463 6125 ntTSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 WWP2-213ENST00000568684 3672 ntTSL 2 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 PTCH1-205ENST00000418258 7815 ntTSL 5 BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 SF3B2-201ENST00000322535 2903 ntAPPRIS P1 TSL 1 (best) BASIC3.2□□□□□ -1.9
KRTAP4-9Q9BYQ8 COL3A1-202ENST00000317840 3873 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 CFAP57-204ENST00000528956 3037 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 NUP210L-202ENST00000368553 2168 ntAPPRIS ALT2 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 LRRC37A2-203ENST00000576629 5669 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 R3HDM2-202ENST00000358907 3974 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 GOLGA2P5-202ENST00000304813 3105 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 SCAF8-202ENST00000367186 4908 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 CEPT1-210ENST00000545121 2251 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 FXR1-202ENST00000357559 8711 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 GOLGA6D-202ENST00000618219 3210 ntAPPRIS ALT2 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC022915.2-201ENST00000522575 2372 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 SZT2-209ENST00000562955 13968 ntAPPRIS P2 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 TMEM255A-203ENST00000371369 3425 ntAPPRIS ALT1 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 SLC8A3-208ENST00000533541 3409 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 IFIT3-202ENST00000371818 2496 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 MRPS11-201ENST00000325844 3644 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 CDV3-202ENST00000420115 3621 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 DOK6-201ENST00000382713 8890 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 SLC10A7-203ENST00000432059 3747 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC040160.1-201ENST00000573063 2677 ntBASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 SUN1-202ENST00000389574 3812 ntAPPRIS P3 TSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 GPR55-202ENST00000392040 3828 ntAPPRIS P1 TSL 5 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF3-202ENST00000299667 2799 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 LINC01266-201ENST00000420823 3948 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 ATG4C-203ENST00000371120 2890 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 AC100757.1-201ENST00000616872 1835 ntBASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 DDX10-203ENST00000526794 6707 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 SLC11A2-205ENST00000545993 1937 ntTSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 EFTUD2-202ENST00000426333 4548 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 CYP24A1-201ENST00000216862 3262 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 ZNF300-201ENST00000274599 3268 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 NAA50-210ENST00000616174 3257 ntTSL 2 BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 PCDHGA10-201ENST00000398610 4617 ntAPPRIS P3 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 LMO3-209ENST00000447609 3365 ntAPPRIS P1 TSL 1 (best) BASIC3.19□□□□□ -1.9
KRTAP4-9Q9BYQ8 KLHL15-201ENST00000328046 6272 ntAPPRIS P1 TSL 2 BASIC3.19□□□□□ -1.9
Retrieved 100 of 98,524 protein–RNA pairs in 130.4 ms