Protein–RNA interactions for Protein: Q9BYR8

KRTAP3-1, Keratin-associated protein 3-1, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-1Q9BYR8 MMP25-AS1-206ENST00000573130 4434 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 PALMD-201ENST00000263174 2510 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 SCIN-209ENST00000519209 2660 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 UFL1-201ENST00000369278 4224 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 PARP2-201ENST00000250416 1886 ntAPPRIS P3 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 SYT14-207ENST00000629778 1860 ntAPPRIS ALT2 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 TENM2-203ENST00000518659 8550 ntAPPRIS P1 TSL 5 BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 PNN-201ENST00000216832 3576 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 ZBTB18-201ENST00000358704 3851 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 NEXN-202ENST00000334785 2607 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 MID1-201ENST00000317552 6463 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 FSTL5-203ENST00000427802 2920 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 AC092724.1-201ENST00000624623 3397 ntBASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 PPP6R3-206ENST00000524904 4292 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 SLC35A5-201ENST00000261034 2444 ntTSL 5 BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 AC092958.1-201ENST00000467198 2569 ntTSL 2 BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 BFAR-201ENST00000261658 3039 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 AC126773.4-201ENST00000612545 3043 ntBASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 ZNF430-201ENST00000261560 3923 ntAPPRIS P1 TSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 MAVS-201ENST00000416600 11596 ntTSL 1 (best) BASIC4□□□□□ -1.77
KRTAP3-1Q9BYR8 CD163-209ENST00000541972 3590 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 NRG3-202ENST00000372142 3136 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 MAPK10-280ENST00000641166 2684 ntAPPRIS ALT1 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 LINC01677-205ENST00000635636 2362 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 FBXO30-201ENST00000237281 9009 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 NBPF12-202ENST00000579935 5035 ntAPPRIS ALT2 TSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RFC3-202ENST00000434425 1461 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 TNFRSF19-204ENST00000403372 4277 ntAPPRIS ALT2 TSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC108751.5-201ENST00000492880 1336 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 FARSB-201ENST00000281828 3369 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 IFT88-201ENST00000319980 3091 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 PSMD6-AS2-201ENST00000472046 2456 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 NUP155-207ENST00000513532 4088 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 NREP-206ENST00000447165 2304 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 GNRHR-201ENST00000226413 2164 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 APOL3-203ENST00000397287 3626 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 SCN8A-203ENST00000545061 11433 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RHOJ-201ENST00000316754 3302 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 N4BP2L1-209ENST00000530622 1897 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 THADA-205ENST00000404790 3043 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 CRNKL1-207ENST00000536226 4009 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 SPTLC3-201ENST00000399002 6169 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 ZNF257-203ENST00000594947 3874 ntAPPRIS P1 TSL 4 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 SAMMSON-222ENST00000641901 2727 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 LINC01492-201ENST00000411575 3738 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 ZNF182-202ENST00000396965 3586 ntAPPRIS P4 TSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 EIF4G3-201ENST00000264211 5802 ntAPPRIS P3 TSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 SCGB1D2-201ENST00000244926 480 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 DEFB4A-201ENST00000302247 380 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 Y_RNA.274-201ENST00000364714 101 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 LST1-211ENST00000376110 433 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 COX17P1-201ENST00000378775 192 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU1-11P-201ENST00000383975 164 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 TRAJ32-201ENST00000390505 66 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 SAR1AP2-201ENST00000392696 594 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL138885.1-201ENST00000405921 675 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RN7SKP261-201ENST00000410948 278 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AP000275.1-201ENST00000411943 390 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL356273.2-201ENST00000413701 973 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL593856.1-201ENST00000419949 805 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 WRBP1-201ENST00000423352 334 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL356309.1-201ENST00000425153 339 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL162727.2-201ENST00000428429 395 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 SLC36A1-202ENST00000429484 977 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 MYL8P-204ENST00000431574 518 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL389925.1-201ENST00000432257 728 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 ANKRD54P1-201ENST00000433115 471 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL645568.3-201ENST00000433683 316 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL954705.1-201ENST00000435277 559 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 CFL1P8-201ENST00000436148 475 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC005094.1-201ENST00000440420 368 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 DDX3X-202ENST00000441189 1051 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 CHEK2P4-201ENST00000450340 246 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL157896.1-201ENST00000451617 790 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL450023.2-201ENST00000453276 545 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 Z82173.1-201ENST00000453924 484 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC239859.3-201ENST00000456469 408 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AP003774.3-201ENST00000457725 985 ntTSL 2 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 ABRACL-202ENST00000461027 456 ntTSL 1 (best) BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RN7SL541P-201ENST00000464317 283 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC087884.1-201ENST00000469738 328 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AL136126.1-201ENST00000473603 402 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RPS27AP1-201ENST00000475545 471 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 NDUFS5P2-201ENST00000484004 306 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RN7SL432P-201ENST00000484057 298 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC133435.1-201ENST00000498753 576 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC233724.1-201ENST00000503894 233 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC121154.1-201ENST00000507299 430 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RBBP4P6-201ENST00000508098 202 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AC114316.1-201ENST00000511323 278 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 LINC00499-204ENST00000515282 579 ntTSL 5 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU2-69P-201ENST00000516061 100 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU6-397P-201ENST00000516226 104 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU4-71P-201ENST00000516258 113 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 RNU6-1212P-201ENST00000517023 104 ntBASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 AP001208.1-201ENST00000518612 408 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 NACA2-201ENST00000521764 777 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 ERLIN2-210ENST00000523107 771 ntTSL 3 BASIC3.99□□□□□ -1.77
KRTAP3-1Q9BYR8 FABP5P7-201ENST00000524732 405 ntBASIC3.99□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 114.2 ms