Protein–RNA interactions for Protein: O75445

USH2A, Usherin, humanhuman

Predictions only

Length 5,202 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
USH2AO75445 CFH-201ENST00000359637 1454 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 CTNND1-218ENST00000528232 5745 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 PHTF2-208ENST00000450574 2516 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 FRMPD3-201ENST00000276185 7304 ntAPPRIS P2 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 LMNTD1-202ENST00000413632 1520 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 TCEA1P2-201ENST00000420496 906 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC005300.1-201ENST00000428401 373 ntBASIC1.88□□□□□ -2.11
USH2AO75445 TAS2R39-201ENST00000446620 1017 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
USH2AO75445 AC080013.1-206ENST00000496842 712 ntTSL 2 BASIC1.88□□□□□ -2.11
USH2AO75445 AC113404.3-201ENST00000506621 555 ntTSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 AC021193.1-201ENST00000511607 420 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC093331.2-201ENST00000520459 677 ntTSL 3 BASIC1.88□□□□□ -2.11
USH2AO75445 AC092709.1-201ENST00000521355 1045 ntBASIC1.88□□□□□ -2.11
USH2AO75445 FAXC-204ENST00000538471 941 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 AC007458.1-201ENST00000542812 373 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC027287.2-201ENST00000547559 592 ntTSL 4 BASIC1.88□□□□□ -2.11
USH2AO75445 AC004801.3-201ENST00000547602 962 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 LINC02386-201ENST00000551202 509 ntTSL 3 BASIC1.88□□□□□ -2.11
USH2AO75445 TFPI-203ENST00000392365 3649 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 LINC01478-201ENST00000587877 2068 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 GFRA1-203ENST00000369236 9109 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 AHNAK2-201ENST00000333244 18254 ntAPPRIS P1 TSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 DDX60-201ENST00000393743 6071 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 UNC79-203ENST00000553484 9100 ntTSL 5 BASIC1.88□□□□□ -2.11
USH2AO75445 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 CYBB-201ENST00000378588 4324 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 SCUBE3-201ENST00000274938 7356 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 HIF1A-201ENST00000323441 3555 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 KCNIP4-202ENST00000382148 2481 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 AL353743.1-202ENST00000431724 1695 ntBASIC1.88□□□□□ -2.11
USH2AO75445 FSTL5-202ENST00000379164 4757 ntAPPRIS ALT1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 FAT2-201ENST00000261800 14534 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 ADAMTS6-203ENST00000381055 7311 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 NOL8P1-201ENST00000508336 3529 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AF131216.1-201ENST00000498997 5856 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC1.88□□□□□ -2.11
USH2AO75445 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 RNA5SP151-201ENST00000365632 117 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AL935212.3-201ENST00000450729 284 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC098799.3-201ENST00000506095 438 ntBASIC1.88□□□□□ -2.11
USH2AO75445 LINC02466-202ENST00000509105 653 ntTSL 3 BASIC1.88□□□□□ -2.11
USH2AO75445 AC104619.4-201ENST00000510773 249 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AL451007.1-201ENST00000595491 289 ntBASIC1.88□□□□□ -2.11
USH2AO75445 AC007998.5-201ENST00000622938 237 ntBASIC1.88□□□□□ -2.11
USH2AO75445 PCDH11X-204ENST00000373088 4069 ntAPPRIS ALT2 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 ZNF230-201ENST00000429154 4115 ntAPPRIS P1 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC1.88□□□□□ -2.11
USH2AO75445 TMPRSS11F-201ENST00000356291 2088 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 TRBV24OR9-2-201ENST00000416632 435 ntBASIC1.87□□□□□ -2.11
USH2AO75445 C21orf91-OT1-202ENST00000430815 717 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 ISM1-AS1-201ENST00000431407 652 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 AC005358.1-201ENST00000445508 1143 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 BTF3P6-201ENST00000448054 499 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AC023442.3-203ENST00000530946 533 ntTSL 4 BASIC1.87□□□□□ -2.11
USH2AO75445 GLYCAM1-202ENST00000546607 553 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 LINC01405-202ENST00000547607 674 ntTSL 3 BASIC1.87□□□□□ -2.11
USH2AO75445 CR383656.14-201ENST00000551951 406 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AL136501.1-201ENST00000555913 790 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 LINC01900-202ENST00000584898 603 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 MIR5684-201ENST00000585074 65 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AP001357.1-201ENST00000586304 1053 ntBASIC1.87□□□□□ -2.11
USH2AO75445 TTN-AS1-228ENST00000589234 751 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 AC079684.1-201ENST00000621405 437 ntBASIC1.87□□□□□ -2.11
USH2AO75445 NPSR1-AS1-202ENST00000419766 4821 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 OR5AU1-202ENST00000641039 8232 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
USH2AO75445 BTLA-201ENST00000334529 3213 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 VIRMA-201ENST00000297591 6528 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 DTNA-230ENST00000598334 3201 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 TRGC1-201ENST00000443402 2730 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
USH2AO75445 MAP1B-201ENST00000296755 12036 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 NDUFA9-201ENST00000266544 8363 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 ZNF592-201ENST00000299927 7863 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 LINC02035-201ENST00000610128 5476 ntBASIC1.87□□□□□ -2.11
USH2AO75445 PANK1-202ENST00000322191 2513 ntTSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 AL031429.1-201ENST00000426775 749 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 AC018832.1-201ENST00000428171 566 ntTSL 4 BASIC1.87□□□□□ -2.11
USH2AO75445 AL591503.2-201ENST00000442314 1005 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AC003991.1-205ENST00000447758 625 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 AP001804.1-201ENST00000526868 919 ntBASIC1.87□□□□□ -2.11
USH2AO75445 AC006023.1-201ENST00000603944 259 ntBASIC1.87□□□□□ -2.11
USH2AO75445 Z98200.1-201ENST00000607298 470 ntBASIC1.87□□□□□ -2.11
USH2AO75445 LINC00343-210ENST00000608220 806 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 AL645927.2-201ENST00000618350 349 ntBASIC1.87□□□□□ -2.11
USH2AO75445 LPA-201ENST00000316300 6414 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 MYBPC1-201ENST00000361466 3899 ntAPPRIS P4 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 LINC02240-201ENST00000564199 1336 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 FAP-201ENST00000188790 2780 ntAPPRIS P2 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 GPATCH2-202ENST00000366935 5851 ntAPPRIS P1 TSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 ASPM-203ENST00000367409 10887 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 SLC7A11-201ENST00000280612 9645 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 LINC00919-201ENST00000561513 1658 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 OR10J1-203ENST00000642080 3503 ntAPPRIS P1 BASIC1.87□□□□□ -2.11
USH2AO75445 HACD3-209ENST00000566511 1782 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 RYR3-208ENST00000622037 15564 ntAPPRIS ALT2 TSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 SLIT3-202ENST00000404867 8903 ntTSL 5 BASIC1.87□□□□□ -2.11
USH2AO75445 RIMS1-212ENST00000517827 3065 ntTSL 2 BASIC1.87□□□□□ -2.11
USH2AO75445 ATP2C1-202ENST00000359644 3401 ntAPPRIS P3 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 ITSN2-202ENST00000361999 5814 ntAPPRIS ALT2 TSL 1 (best) BASIC1.87□□□□□ -2.11
USH2AO75445 FAM214A-216ENST00000619572 3548 ntAPPRIS P1 TSL 1 (best) BASIC1.87□□□□□ -2.11
Retrieved 100 of 98,524 protein–RNA pairs in 96.3 ms