RNA–Protein interactions for RNA: ENST00000564199.1

LINC02240-201, Transcript of long intergenic non-protein coding RNA 2240, humanhuman

TSL 2 BASIC

Gene LINC02240, Length 1,336 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02240-201ENST00000564199 AEBP2Q6ZN18 517 aaPredicted RBP29.62■■■□□ 2.33
LINC02240-201ENST00000564199 CHIC1Q5VXU3 224 aa27.9■■■□□ 2.06
LINC02240-201ENST00000564199 SENP3Q9H4L4 574 aaPredicted RBP25.24■■□□□ 1.63
LINC02240-201ENST00000564199 PHF23Q9BUL5 403 aaPredicted RBP24.88■■□□□ 1.57
LINC02240-201ENST00000564199 FOXD1Q16676 465 aa23.58■■□□□ 1.36
LINC02240-201ENST00000564199 PLPPR3Q6T4P5 718 aa22.16■■□□□ 1.14
LINC02240-201ENST00000564199 MSH5O43196 834 aa22.1■■□□□ 1.13
LINC02240-201ENST00000564199 POTEDQ86YR6 584 aa21.96■■□□□ 1.11
LINC02240-201ENST00000564199 PIAS4Q8N2W9 510 aaPredicted RBP21.94■■□□□ 1.1
LINC02240-201ENST00000564199 PPP6R1Q9UPN7 881 aa21.9■■□□□ 1.1
LINC02240-201ENST00000564199 ADRA2BP18089 450 aa21.79■■□□□ 1.08
LINC02240-201ENST00000564199 MAPK8IP2Q13387 824 aaPredicted RBP20.08■□□□□ 0.81
LINC02240-201ENST00000564199 DMRT2Q9Y5R5 561 aa20.01■□□□□ 0.79
LINC02240-201ENST00000564199 SCAF1Q9H7N4 1312 aaKnown RBP19.88■□□□□ 0.77
LINC02240-201ENST00000564199 PPP4R3CPQ6ZMV5 832 aa19.41■□□□□ 0.7
LINC02240-201ENST00000564199 HOXD11P31277 338 aaPredicted RBP19.2■□□□□ 0.66
LINC02240-201ENST00000564199 DCAF8L1A6NGE4 600 aa19.1■□□□□ 0.65
LINC02240-201ENST00000564199 CNKSR2Q8WXI2 1034 aa19.08■□□□□ 0.65
LINC02240-201ENST00000564199 CACNB1Q02641 598 aaPredicted RBP19.07■□□□□ 0.64
LINC02240-201ENST00000564199 RNF216Q9NWF9 866 aaPredicted RBP18.98■□□□□ 0.63
LINC02240-201ENST00000564199 RNF39Q9H2S5 420 aa18.88■□□□□ 0.61
LINC02240-201ENST00000564199 DNAJC5BQ9UF47 199 aa18.59■□□□□ 0.57
LINC02240-201ENST00000564199 C1QBPQ07021 282 aaKnown RBP18.56■□□□□ 0.56
LINC02240-201ENST00000564199 NCBP3Q53F19 620 aaKnown RBP18.55■□□□□ 0.56
LINC02240-201ENST00000564199 NPM3O75607 178 aaKnown RBP18.34■□□□□ 0.53
LINC02240-201ENST00000564199 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.22■□□□□ 0.51
LINC02240-201ENST00000564199 U3KPZ7 1027 aaPredicted RBP17.88■□□□□ 0.45
LINC02240-201ENST00000564199 KCNA4P22459 653 aa17.8■□□□□ 0.44
LINC02240-201ENST00000564199 SPINK5Q9NQ38 1064 aaPredicted RBP17.67■□□□□ 0.42
LINC02240-201ENST00000564199 DSG3P32926 999 aa17.61■□□□□ 0.41
LINC02240-201ENST00000564199 SLC4A2P04920 1241 aa17.6■□□□□ 0.41
LINC02240-201ENST00000564199 CAPN15O75808 1086 aa17.59■□□□□ 0.41
LINC02240-201ENST00000564199 APLP2Q06481 763 aa17.28■□□□□ 0.36
LINC02240-201ENST00000564199 TRHP20396 242 aaPredicted RBP17.26■□□□□ 0.35
LINC02240-201ENST00000564199 ZNF219Q9P2Y4 722 aaPredicted RBP17.24■□□□□ 0.35
LINC02240-201ENST00000564199 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.23■□□□□ 0.35
LINC02240-201ENST00000564199 HNRNPUL2Q1KMD3 747 aaKnown RBP17.23■□□□□ 0.35
LINC02240-201ENST00000564199 ABCB7O75027 752 aa17.19■□□□□ 0.34
LINC02240-201ENST00000564199 POTEHQ6S545 545 aa17.15■□□□□ 0.34
LINC02240-201ENST00000564199 SAMD1Q6SPF0 538 aaPredicted RBP17.15■□□□□ 0.34
LINC02240-201ENST00000564199 MYCNP04198 464 aaPredicted RBP16.95■□□□□ 0.3
LINC02240-201ENST00000564199 POLA2Q14181 598 aa16.77■□□□□ 0.28
LINC02240-201ENST00000564199 RBM42Q9BTD8 480 aaKnown RBP16.75■□□□□ 0.27
LINC02240-201ENST00000564199 SLC4A1APQ9BWU0 796 aaKnown RBP16.73■□□□□ 0.27
LINC02240-201ENST00000564199 FOXD4L1Q9NU39 408 aa16.67■□□□□ 0.26
LINC02240-201ENST00000564199 ATF5Q9Y2D1 282 aaPredicted RBP16.62■□□□□ 0.25
LINC02240-201ENST00000564199 CHRDL2Q6WN34 429 aa16.49■□□□□ 0.23
LINC02240-201ENST00000564199 ZBTB12Q9Y330 459 aaPredicted RBP16.42■□□□□ 0.22
LINC02240-201ENST00000564199 ZBTB22O15209 634 aa16.41■□□□□ 0.22
LINC02240-201ENST00000564199 AKT1S1Q96B36 256 aa16.35■□□□□ 0.21
LINC02240-201ENST00000564199 OSCARQ8IYS5 282 aa16.26■□□□□ 0.19
LINC02240-201ENST00000564199 REM2Q8IYK8 340 aaPredicted RBP16.2■□□□□ 0.18
LINC02240-201ENST00000564199 ATXN8OSP0DMR3 200 aa16.19■□□□□ 0.18
LINC02240-201ENST00000564199 PIP4P2Q8N4L2 257 aa16.07■□□□□ 0.16
LINC02240-201ENST00000564199 PITPNM1O00562 1244 aa16.04■□□□□ 0.16
LINC02240-201ENST00000564199 SP7Q8TDD2 431 aaPredicted RBP15.98■□□□□ 0.15
LINC02240-201ENST00000564199 FXR2P51116 673 aaKnown RBP eCLIP15.95■□□□□ 0.14
LINC02240-201ENST00000564199 SPDYE2BA6NHP3 402 aa15.92■□□□□ 0.14
LINC02240-201ENST00000564199 SPDYE6P0CI01 402 aa15.92■□□□□ 0.14
LINC02240-201ENST00000564199 SPDYE2Q495Y8 402 aa15.92■□□□□ 0.14
LINC02240-201ENST00000564199 FBLN2P98095 1184 aa15.9■□□□□ 0.14
LINC02240-201ENST00000564199 MKRN4PQ13434 485 aaPredicted RBP15.85■□□□□ 0.13
LINC02240-201ENST00000564199 HAX1O00165 279 aa15.78■□□□□ 0.12
LINC02240-201ENST00000564199 SSUH2Q9Y2M2 353 aa15.71■□□□□ 0.11
LINC02240-201ENST00000564199 SPDYE1Q8NFV5 336 aaPredicted RBP15.67■□□□□ 0.1
LINC02240-201ENST00000564199 EVX2Q03828 476 aa15.65■□□□□ 0.1
LINC02240-201ENST00000564199 ZNF692Q9BU19 519 aaPredicted RBP15.65■□□□□ 0.1
LINC02240-201ENST00000564199 CLEC11AQ9Y240 323 aa15.61■□□□□ 0.09
LINC02240-201ENST00000564199 PRKAR2AP13861 404 aaKnown RBP15.6■□□□□ 0.09
LINC02240-201ENST00000564199 C19orf67A6NJJ6 358 aa15.45■□□□□ 0.06
LINC02240-201ENST00000564199 PABPN1Q86U42 306 aaKnown RBP eCLIP15.43■□□□□ 0.06
LINC02240-201ENST00000564199 CSRNP3Q8WYN3 585 aa15.43■□□□□ 0.06
LINC02240-201ENST00000564199 CHADLQ6NUI6 762 aa15.38■□□□□ 0.05
LINC02240-201ENST00000564199 PRR29P0C7W0 189 aa15.34■□□□□ 0.05
LINC02240-201ENST00000564199 GABBR2O75899 941 aa15.25■□□□□ 0.03
LINC02240-201ENST00000564199 FARP1Q9Y4F1 1045 aaPredicted RBP15.15■□□□□ 0.02
LINC02240-201ENST00000564199 CD44P16070 742 aaKnown RBP15.09■□□□□ 0.01
LINC02240-201ENST00000564199 EHMT2Q96KQ7 1210 aa15.05■□□□□ -0
LINC02240-201ENST00000564199 POTEIP0CG38 1075 aa14.97□□□□□ -0.01
LINC02240-201ENST00000564199 LHX8Q68G74 356 aa14.97□□□□□ -0.01
LINC02240-201ENST00000564199 CREBZFQ9NS37 354 aa14.97□□□□□ -0.01
LINC02240-201ENST00000564199 STAG3Q9UJ98 1225 aa14.94□□□□□ -0.02
LINC02240-201ENST00000564199 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
LINC02240-201ENST00000564199 CLCN6P51797 869 aa14.92□□□□□ -0.02
LINC02240-201ENST00000564199 ZNF579Q8NAF0 562 aaKnown RBP14.89□□□□□ -0.03
LINC02240-201ENST00000564199 ZRANB1Q9UGI0 708 aa14.84□□□□□ -0.03
LINC02240-201ENST00000564199 DCBLD2Q96PD2 775 aa14.74□□□□□ -0.05
LINC02240-201ENST00000564199 MNX1P50219 401 aaPredicted RBP14.72□□□□□ -0.05
LINC02240-201ENST00000564199 GALR2O43603 387 aaPredicted RBP14.7□□□□□ -0.06
LINC02240-201ENST00000564199 PHF12Q96QT6 1004 aa14.65□□□□□ -0.06
LINC02240-201ENST00000564199 PAK3O75914 559 aaPredicted RBP14.63□□□□□ -0.07
LINC02240-201ENST00000564199 NPM1P06748 294 aaKnown RBP eCLIP14.63□□□□□ -0.07
LINC02240-201ENST00000564199 PROM2Q8N271 834 aa14.63□□□□□ -0.07
LINC02240-201ENST00000564199 POTEB2H3BUK9 544 aa14.47□□□□□ -0.09
LINC02240-201ENST00000564199 PELP1Q8IZL8 1130 aaKnown RBP14.46□□□□□ -0.09
LINC02240-201ENST00000564199 OTUD5Q96G74 571 aa14.44□□□□□ -0.1
LINC02240-201ENST00000564199 MS4A3Q96HJ5 214 aa14.44□□□□□ -0.1
LINC02240-201ENST00000564199 ASTLQ6HA08 431 aaPredicted RBP14.4□□□□□ -0.1
LINC02240-201ENST00000564199 TSPYL2Q9H2G4 693 aaPredicted RBP14.37□□□□□ -0.11
LINC02240-201ENST00000564199 CCDC61Q9Y6R9 512 aa14.37□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 10.8 ms