RNA–Protein interactions for RNA: ENST00000450574.5

PHTF2-208, Transcript of putative homeodomain transcription factor 2, humanhuman

TSL 1 (best) BASIC

Gene PHTF2, Length 2,516 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHTF2-208ENST00000450574 AEBP2Q6ZN18 517 aaPredicted RBP12.76□□□□□ -0.37
PHTF2-208ENST00000450574 CHIC1Q5VXU3 224 aa12.3□□□□□ -0.44
PHTF2-208ENST00000450574 POTEDQ86YR6 584 aa11.58□□□□□ -0.56
PHTF2-208ENST00000450574 SENP3Q9H4L4 574 aaPredicted RBP11.39□□□□□ -0.59
PHTF2-208ENST00000450574 SLC24A1O60721 1099 aa11.19□□□□□ -0.62
PHTF2-208ENST00000450574 PHF23Q9BUL5 403 aaPredicted RBP10.92□□□□□ -0.66
PHTF2-208ENST00000450574 EHMT2Q96KQ7 1210 aa10.69□□□□□ -0.7
PHTF2-208ENST00000450574 MSH5O43196 834 aa10.5□□□□□ -0.73
PHTF2-208ENST00000450574 FOXD1Q16676 465 aa10.49□□□□□ -0.73
PHTF2-208ENST00000450574 PLPPR3Q6T4P5 718 aa10.34□□□□□ -0.75
PHTF2-208ENST00000450574 RTN4Q9NQC3 1192 aaKnown RBP10.24□□□□□ -0.77
PHTF2-208ENST00000450574 DAXXQ9UER7 740 aaPredicted RBP9.99□□□□□ -0.81
PHTF2-208ENST00000450574 CSRNP3Q8WYN3 585 aa9.96□□□□□ -0.81
PHTF2-208ENST00000450574 KCNA4P22459 653 aa9.95□□□□□ -0.82
PHTF2-208ENST00000450574 NCBP3Q53F19 620 aaKnown RBP9.95□□□□□ -0.82
PHTF2-208ENST00000450574 AMER1Q5JTC6 1135 aaPredicted RBP9.95□□□□□ -0.82
PHTF2-208ENST00000450574 PRKCSHP14314 528 aaPredicted RBP9.75□□□□□ -0.85
PHTF2-208ENST00000450574 PIAS4Q8N2W9 510 aaPredicted RBP9.61□□□□□ -0.87
PHTF2-208ENST00000450574 NISCHQ9Y2I1 1504 aa9.6□□□□□ -0.87
PHTF2-208ENST00000450574 TIMELESSQ9UNS1 1208 aa9.51□□□□□ -0.89
PHTF2-208ENST00000450574 ARXQ96QS3 562 aa9.48□□□□□ -0.89
PHTF2-208ENST00000450574 SLC4A1APQ9BWU0 796 aaKnown RBP9.47□□□□□ -0.89
PHTF2-208ENST00000450574 TAOK2Q9UL54 1235 aa9.42□□□□□ -0.9
PHTF2-208ENST00000450574 CACNB1Q02641 598 aaPredicted RBP9.41□□□□□ -0.9
PHTF2-208ENST00000450574 TULP1O00294 542 aaPredicted RBP9.36□□□□□ -0.91
PHTF2-208ENST00000450574 APLP2Q06481 763 aa9.3□□□□□ -0.92
PHTF2-208ENST00000450574 BCANQ96GW7 911 aa9.29□□□□□ -0.92
PHTF2-208ENST00000450574 TPRNQ4KMQ1 711 aa9.27□□□□□ -0.93
PHTF2-208ENST00000450574 PLCB2Q00722 1185 aa9.21□□□□□ -0.94
PHTF2-208ENST00000450574 ADRA2BP18089 450 aa9.2□□□□□ -0.94
PHTF2-208ENST00000450574 HOMEZQ8IX15 550 aa9.19□□□□□ -0.94
PHTF2-208ENST00000450574 ZBTB22O15209 634 aa9.19□□□□□ -0.94
PHTF2-208ENST00000450574 TTBK1Q5TCY1 1321 aaPredicted RBP9.16□□□□□ -0.94
PHTF2-208ENST00000450574 PELP1Q8IZL8 1130 aaKnown RBP9.15□□□□□ -0.94
PHTF2-208ENST00000450574 RANGAP1P46060 587 aaPredicted RBP9.14□□□□□ -0.95
PHTF2-208ENST00000450574 ERICH6Q7L0X2 663 aa9.1□□□□□ -0.95
PHTF2-208ENST00000450574 HAP1P54257 671 aaPredicted RBP9.09□□□□□ -0.95
PHTF2-208ENST00000450574 GTF3C3Q9Y5Q9 886 aa9.06□□□□□ -0.96
PHTF2-208ENST00000450574 KLHL34Q8N239 644 aa9.04□□□□□ -0.96
PHTF2-208ENST00000450574 PODXL2Q9NZ53 605 aa9.03□□□□□ -0.96
PHTF2-208ENST00000450574 MYT1Q01538 1121 aa9□□□□□ -0.97
PHTF2-208ENST00000450574 POTEHQ6S545 545 aa8.93□□□□□ -0.98
PHTF2-208ENST00000450574 FKBP8Q14318 412 aa8.91□□□□□ -0.98
PHTF2-208ENST00000450574 PPP6R1Q9UPN7 881 aa8.91□□□□□ -0.98
PHTF2-208ENST00000450574 TMEM132AQ24JP5 1023 aa8.87□□□□□ -0.99
PHTF2-208ENST00000450574 NPM3O75607 178 aaKnown RBP8.85□□□□□ -0.99
PHTF2-208ENST00000450574 VSIG10Q8N0Z9 540 aa8.85□□□□□ -0.99
PHTF2-208ENST00000450574 DMRT2Q9Y5R5 561 aa8.84□□□□□ -0.99
PHTF2-208ENST00000450574 KDM2AQ9Y2K7 1162 aa8.83□□□□□ -1
PHTF2-208ENST00000450574 NPM2Q86SE8 214 aaKnown RBP8.8□□□□□ -1
PHTF2-208ENST00000450574 C14orf37Q86TY3 774 aa8.79□□□□□ -1
PHTF2-208ENST00000450574 FBLN2P98095 1184 aa8.76□□□□□ -1.01
PHTF2-208ENST00000450574 EIF5BO60841 1220 aaKnown RBP8.74□□□□□ -1.01
PHTF2-208ENST00000450574 RNF39Q9H2S5 420 aa8.7□□□□□ -1.02
PHTF2-208ENST00000450574 TRIM26Q12899 539 aaPredicted RBP8.69□□□□□ -1.02
PHTF2-208ENST00000450574 C1QBPQ07021 282 aaKnown RBP8.67□□□□□ -1.02
PHTF2-208ENST00000450574 SUPT5HO00267 1087 aaKnown RBP8.66□□□□□ -1.02
PHTF2-208ENST00000450574 PPP4R3CPQ6ZMV5 832 aa8.64□□□□□ -1.03
PHTF2-208ENST00000450574 DCAF8L2P0C7V8 631 aa8.63□□□□□ -1.03
PHTF2-208ENST00000450574 FBXO3Q9UK99 471 aa8.61□□□□□ -1.03
PHTF2-208ENST00000450574 UBTFP17480 764 aaKnown RBP8.6□□□□□ -1.03
PHTF2-208ENST00000450574 FOXD4L1Q9NU39 408 aa8.59□□□□□ -1.03
PHTF2-208ENST00000450574 SCAF1Q9H7N4 1312 aaKnown RBP8.58□□□□□ -1.04
PHTF2-208ENST00000450574 HRCP23327 699 aa8.58□□□□□ -1.04
PHTF2-208ENST00000450574 LOC105371045A0A1W2PR82 267 aa8.5□□□□□ -1.05
PHTF2-208ENST00000450574 PLEKHG5O94827 1062 aa8.49□□□□□ -1.05
PHTF2-208ENST00000450574 CCDC180Q9P1Z9 1646 aa8.48□□□□□ -1.05
PHTF2-208ENST00000450574 PAXIP1Q6ZW49 1069 aaPredicted RBP8.42□□□□□ -1.06
PHTF2-208ENST00000450574 NBR1Q14596 966 aa8.4□□□□□ -1.06
PHTF2-208ENST00000450574 CFAP44Q96MT7 982 aa8.4□□□□□ -1.06
PHTF2-208ENST00000450574 TSHZ2Q9NRE2 1034 aa8.38□□□□□ -1.07
PHTF2-208ENST00000450574 DNAJC5BQ9UF47 199 aa8.37□□□□□ -1.07
PHTF2-208ENST00000450574 MAPK8IP2Q13387 824 aaPredicted RBP8.36□□□□□ -1.07
PHTF2-208ENST00000450574 DCAF8L1A6NGE4 600 aa8.32□□□□□ -1.08
PHTF2-208ENST00000450574 ZBTB4Q9P1Z0 1013 aaPredicted RBP8.32□□□□□ -1.08
PHTF2-208ENST00000450574 NPM1P06748 294 aaKnown RBP eCLIP8.31□□□□□ -1.08
PHTF2-208ENST00000450574 PKD2Q13563 968 aa8.31□□□□□ -1.08
PHTF2-208ENST00000450574 BBXQ8WY36 941 aaPredicted RBP8.28□□□□□ -1.08
PHTF2-208ENST00000450574 IGSF3O75054 1194 aa8.25□□□□□ -1.09
PHTF2-208ENST00000450574 TRHP20396 242 aaPredicted RBP8.23□□□□□ -1.09
PHTF2-208ENST00000450574 CHMP4AQ9BY43 222 aa8.2□□□□□ -1.1
PHTF2-208ENST00000450574 CCDC9Q9Y3X0 531 aaKnown RBP8.2□□□□□ -1.1
PHTF2-208ENST00000450574 ARID3AQ99856 593 aa8.18□□□□□ -1.1
PHTF2-208ENST00000450574 DNAJC5Q9H3Z4 198 aa8.18□□□□□ -1.1
PHTF2-208ENST00000450574 HOXD11P31277 338 aaPredicted RBP8.17□□□□□ -1.1
PHTF2-208ENST00000450574 CDK11BP21127 795 aaKnown RBP8.15□□□□□ -1.1
PHTF2-208ENST00000450574 CDK11AQ9UQ88 783 aaPredicted RBP8.15□□□□□ -1.1
PHTF2-208ENST00000450574 IFNLR1Q8IU57 520 aaPredicted RBP8.14□□□□□ -1.11
PHTF2-208ENST00000450574 SPRYD3Q8NCJ5 442 aa8.14□□□□□ -1.11
PHTF2-208ENST00000450574 DCAF1Q9Y4B6 1507 aa8.14□□□□□ -1.11
PHTF2-208ENST00000450574 BRPF1P55201 1214 aaPredicted RBP8.14□□□□□ -1.11
PHTF2-208ENST00000450574 SAMD1Q6SPF0 538 aaPredicted RBP8.13□□□□□ -1.11
PHTF2-208ENST00000450574 NECTIN2Q92692 538 aa8.12□□□□□ -1.11
PHTF2-208ENST00000450574 ZCCHC6Q5VYS8 1495 aaKnown RBP8.12□□□□□ -1.11
PHTF2-208ENST00000450574 SHROOM4Q9ULL8 1493 aa8.11□□□□□ -1.11
PHTF2-208ENST00000450574 PDIA4P13667 645 aaKnown RBP8.11□□□□□ -1.11
PHTF2-208ENST00000450574 CNKSR2Q8WXI2 1034 aa8.09□□□□□ -1.11
PHTF2-208ENST00000450574 VASPP50552 380 aaPredicted RBP8.08□□□□□ -1.12
PHTF2-208ENST00000450574 C1orf115Q9H7X2 142 aa8.08□□□□□ -1.12
PHTF2-208ENST00000450574 ZBTB7CA1YPR0 619 aa8.06□□□□□ -1.12
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms