RNA–Protein interactions for RNA: ENST00000547602.1

AC004801.3-201, humanhuman

TSL 1 (best) BASIC

Gene AC004801.3, Length 962 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
AC004801.3-201ENST00000547602 AEBP2Q6ZN18 517 aaPredicted RBP21.66■■□□□ 1.06
AC004801.3-201ENST00000547602 CHIC1Q5VXU3 224 aa20.86■□□□□ 0.93
AC004801.3-201ENST00000547602 SENP3Q9H4L4 574 aaPredicted RBP18.42■□□□□ 0.54
AC004801.3-201ENST00000547602 PHF23Q9BUL5 403 aaPredicted RBP18.31■□□□□ 0.52
AC004801.3-201ENST00000547602 FOXD1Q16676 465 aa17.13■□□□□ 0.33
AC004801.3-201ENST00000547602 PLPPR3Q6T4P5 718 aa16.78■□□□□ 0.28
AC004801.3-201ENST00000547602 PPP6R1Q9UPN7 881 aa16.25■□□□□ 0.19
AC004801.3-201ENST00000547602 ADRA2BP18089 450 aa16.2■□□□□ 0.18
AC004801.3-201ENST00000547602 PIAS4Q8N2W9 510 aaPredicted RBP16.06■□□□□ 0.16
AC004801.3-201ENST00000547602 MSH5O43196 834 aa15.91■□□□□ 0.14
AC004801.3-201ENST00000547602 POTEDQ86YR6 584 aa15.45■□□□□ 0.06
AC004801.3-201ENST00000547602 SCAF1Q9H7N4 1312 aaKnown RBP14.81□□□□□ -0.04
AC004801.3-201ENST00000547602 MAPK8IP2Q13387 824 aaPredicted RBP14.78□□□□□ -0.04
AC004801.3-201ENST00000547602 PPP4R3CPQ6ZMV5 832 aa14.75□□□□□ -0.05
AC004801.3-201ENST00000547602 DMRT2Q9Y5R5 561 aa14.67□□□□□ -0.06
AC004801.3-201ENST00000547602 CNKSR2Q8WXI2 1034 aa14.41□□□□□ -0.1
AC004801.3-201ENST00000547602 NCBP3Q53F19 620 aaKnown RBP14.26□□□□□ -0.13
AC004801.3-201ENST00000547602 HOXD11P31277 338 aaPredicted RBP14.25□□□□□ -0.13
AC004801.3-201ENST00000547602 RNF216Q9NWF9 866 aaPredicted RBP14.21□□□□□ -0.13
AC004801.3-201ENST00000547602 NPM3O75607 178 aaKnown RBP14.07□□□□□ -0.16
AC004801.3-201ENST00000547602 KCNA4P22459 653 aa14.06□□□□□ -0.16
AC004801.3-201ENST00000547602 DCAF8L1A6NGE4 600 aa13.97□□□□□ -0.17
AC004801.3-201ENST00000547602 DNAJC5BQ9UF47 199 aa13.77□□□□□ -0.21
AC004801.3-201ENST00000547602 RNF39Q9H2S5 420 aa13.62□□□□□ -0.23
AC004801.3-201ENST00000547602 GRWD1Q9BQ67 446 aaKnown RBP eCLIP13.52□□□□□ -0.25
AC004801.3-201ENST00000547602 CACNB1Q02641 598 aaPredicted RBP13.45□□□□□ -0.26
AC004801.3-201ENST00000547602 C1QBPQ07021 282 aaKnown RBP13.43□□□□□ -0.26
AC004801.3-201ENST00000547602 SLC4A2P04920 1241 aa13.37□□□□□ -0.27
AC004801.3-201ENST00000547602 SLC4A1APQ9BWU0 796 aaKnown RBP13.32□□□□□ -0.28
AC004801.3-201ENST00000547602 U3KPZ7 1027 aaPredicted RBP13.31□□□□□ -0.28
AC004801.3-201ENST00000547602 FOXD4L1Q9NU39 408 aa13.02□□□□□ -0.33
AC004801.3-201ENST00000547602 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.01□□□□□ -0.33
AC004801.3-201ENST00000547602 MYCNP04198 464 aaPredicted RBP13.01□□□□□ -0.33
AC004801.3-201ENST00000547602 HNRNPUL2Q1KMD3 747 aaKnown RBP13.01□□□□□ -0.33
AC004801.3-201ENST00000547602 SPINK5Q9NQ38 1064 aaPredicted RBP13.01□□□□□ -0.33
AC004801.3-201ENST00000547602 SAMD1Q6SPF0 538 aaPredicted RBP12.96□□□□□ -0.33
AC004801.3-201ENST00000547602 APLP2Q06481 763 aa12.95□□□□□ -0.34
AC004801.3-201ENST00000547602 ZBTB22O15209 634 aa12.94□□□□□ -0.34
AC004801.3-201ENST00000547602 CAPN15O75808 1086 aa12.94□□□□□ -0.34
AC004801.3-201ENST00000547602 DSG3P32926 999 aa12.85□□□□□ -0.35
AC004801.3-201ENST00000547602 ZNF219Q9P2Y4 722 aaPredicted RBP12.83□□□□□ -0.36
AC004801.3-201ENST00000547602 TRHP20396 242 aaPredicted RBP12.81□□□□□ -0.36
AC004801.3-201ENST00000547602 ABCB7O75027 752 aa12.68□□□□□ -0.38
AC004801.3-201ENST00000547602 ATF5Q9Y2D1 282 aaPredicted RBP12.68□□□□□ -0.38
AC004801.3-201ENST00000547602 ATXN8OSP0DMR3 200 aa12.62□□□□□ -0.39
AC004801.3-201ENST00000547602 CSRNP3Q8WYN3 585 aa12.61□□□□□ -0.39
AC004801.3-201ENST00000547602 POLA2Q14181 598 aa12.55□□□□□ -0.4
AC004801.3-201ENST00000547602 EHMT2Q96KQ7 1210 aa12.55□□□□□ -0.4
AC004801.3-201ENST00000547602 ZBTB12Q9Y330 459 aaPredicted RBP12.34□□□□□ -0.43
AC004801.3-201ENST00000547602 RBM42Q9BTD8 480 aaKnown RBP12.24□□□□□ -0.45
AC004801.3-201ENST00000547602 FBLN2P98095 1184 aa12.15□□□□□ -0.46
AC004801.3-201ENST00000547602 OSCARQ8IYS5 282 aa12.15□□□□□ -0.46
AC004801.3-201ENST00000547602 MKRN4PQ13434 485 aaPredicted RBP12.13□□□□□ -0.47
AC004801.3-201ENST00000547602 AKT1S1Q96B36 256 aa12.03□□□□□ -0.48
AC004801.3-201ENST00000547602 POTEHQ6S545 545 aa12□□□□□ -0.49
AC004801.3-201ENST00000547602 SPDYE2BA6NHP3 402 aa11.99□□□□□ -0.49
AC004801.3-201ENST00000547602 SPDYE6P0CI01 402 aa11.99□□□□□ -0.49
AC004801.3-201ENST00000547602 SPDYE2Q495Y8 402 aa11.99□□□□□ -0.49
AC004801.3-201ENST00000547602 REM2Q8IYK8 340 aaPredicted RBP11.91□□□□□ -0.5
AC004801.3-201ENST00000547602 SSUH2Q9Y2M2 353 aa11.88□□□□□ -0.51
AC004801.3-201ENST00000547602 ZNF692Q9BU19 519 aaPredicted RBP11.86□□□□□ -0.51
AC004801.3-201ENST00000547602 CHRDL2Q6WN34 429 aa11.85□□□□□ -0.51
AC004801.3-201ENST00000547602 PITPNM1O00562 1244 aa11.78□□□□□ -0.52
AC004801.3-201ENST00000547602 PABPN1Q86U42 306 aaKnown RBP eCLIP11.71□□□□□ -0.53
AC004801.3-201ENST00000547602 SPDYE1Q8NFV5 336 aaPredicted RBP11.7□□□□□ -0.54
AC004801.3-201ENST00000547602 SPDYE4A6NLX3 237 aa11.67□□□□□ -0.54
AC004801.3-201ENST00000547602 FXR2P51116 673 aaKnown RBP eCLIP11.64□□□□□ -0.55
AC004801.3-201ENST00000547602 PIP4P2Q8N4L2 257 aa11.64□□□□□ -0.55
AC004801.3-201ENST00000547602 CLEC11AQ9Y240 323 aa11.62□□□□□ -0.55
AC004801.3-201ENST00000547602 PROM2Q8N271 834 aa11.5□□□□□ -0.57
AC004801.3-201ENST00000547602 PRR29P0C7W0 189 aa11.49□□□□□ -0.57
AC004801.3-201ENST00000547602 PRKAR2AP13861 404 aaKnown RBP11.46□□□□□ -0.57
AC004801.3-201ENST00000547602 STAG3Q9UJ98 1225 aa11.45□□□□□ -0.58
AC004801.3-201ENST00000547602 FKBP8Q14318 412 aa11.38□□□□□ -0.59
AC004801.3-201ENST00000547602 CHADLQ6NUI6 762 aa11.38□□□□□ -0.59
AC004801.3-201ENST00000547602 HAX1O00165 279 aa11.32□□□□□ -0.6
AC004801.3-201ENST00000547602 CREBZFQ9NS37 354 aa11.31□□□□□ -0.6
AC004801.3-201ENST00000547602 FARP1Q9Y4F1 1045 aaPredicted RBP11.27□□□□□ -0.61
AC004801.3-201ENST00000547602 C19orf67A6NJJ6 358 aa11.25□□□□□ -0.61
AC004801.3-201ENST00000547602 EVX2Q03828 476 aa11.23□□□□□ -0.61
AC004801.3-201ENST00000547602 SP7Q8TDD2 431 aaPredicted RBP11.23□□□□□ -0.61
AC004801.3-201ENST00000547602 MNX1P50219 401 aaPredicted RBP11.17□□□□□ -0.62
AC004801.3-201ENST00000547602 CD44P16070 742 aaKnown RBP11.11□□□□□ -0.63
AC004801.3-201ENST00000547602 NPM1P06748 294 aaKnown RBP eCLIP11.08□□□□□ -0.64
AC004801.3-201ENST00000547602 MIER1Q8N108 512 aa11.08□□□□□ -0.64
AC004801.3-201ENST00000547602 FBXO3Q9UK99 471 aa11.07□□□□□ -0.64
AC004801.3-201ENST00000547602 PLEKHG5O94827 1062 aa11.04□□□□□ -0.64
AC004801.3-201ENST00000547602 PLCD3Q8N3E9 789 aa11.03□□□□□ -0.64
AC004801.3-201ENST00000547602 ZRANB1Q9UGI0 708 aa11□□□□□ -0.65
AC004801.3-201ENST00000547602 GABBR2O75899 941 aa10.99□□□□□ -0.65
AC004801.3-201ENST00000547602 ZNF579Q8NAF0 562 aaKnown RBP10.99□□□□□ -0.65
AC004801.3-201ENST00000547602 PAK3O75914 559 aaPredicted RBP10.96□□□□□ -0.65
AC004801.3-201ENST00000547602 VASPP50552 380 aaPredicted RBP10.94□□□□□ -0.66
AC004801.3-201ENST00000547602 CLCN6P51797 869 aa10.94□□□□□ -0.66
AC004801.3-201ENST00000547602 ZBTB47Q9UFB7 747 aaPredicted RBP10.94□□□□□ -0.66
AC004801.3-201ENST00000547602 RASEFQ8IZ41 740 aa10.89□□□□□ -0.67
AC004801.3-201ENST00000547602 NUBP1P53384 320 aa10.88□□□□□ -0.67
AC004801.3-201ENST00000547602 PHF12Q96QT6 1004 aa10.88□□□□□ -0.67
AC004801.3-201ENST00000547602 TSPYL2Q9H2G4 693 aaPredicted RBP10.88□□□□□ -0.67
AC004801.3-201ENST00000547602 CCDC61Q9Y6R9 512 aa10.86□□□□□ -0.67
Retrieved 100 of 20,778 RNA–protein pairs in 7.5 ms