Protein–RNA interactions for Protein: Q6PCD5

RFWD3, E3 ubiquitin-protein ligase RFWD3, humanhuman

Predictions only

Length 774 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFWD3Q6PCD5 MIR7641-1-201ENST00000627518 61 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 ANKRD34C-201ENST00000421388 4951 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 RBMS3-202ENST00000383766 2757 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 VPS13C-201ENST00000249837 13300 ntAPPRIS P3 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 RAP1B-201ENST00000250559 13438 ntAPPRIS P1 TSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 CUL4AP1-201ENST00000514750 1863 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 IL6ST-212ENST00000522633 1878 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 KARSP3-201ENST00000571212 1504 ntBASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 LRRTM4-203ENST00000409282 2451 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
RFWD3Q6PCD5 MAP2-202ENST00000360351 9711 ntAPPRIS P2 TSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 WDFY3-201ENST00000295888 14247 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 PTCD2-202ENST00000380639 11151 ntAPPRIS P1 TSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 CNGA1-209ENST00000544810 2722 ntAPPRIS ALT2 TSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 GRIK2-204ENST00000369137 4272 ntTSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 OR51H2P-202ENST00000641424 3046 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AL391684.1-202ENST00000641293 1636 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 CCSER2-210ENST00000543283 5888 ntTSL 2 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 ABCB5-202ENST00000404938 5811 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 PARP11-201ENST00000228820 4424 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 C8orf4-201ENST00000315792 1854 ntAPPRIS P1 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 MIR141-201ENST00000384975 95 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 Z98745.1-201ENST00000402553 494 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 HDGFP1-201ENST00000405943 252 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC009237.10-201ENST00000414112 510 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC004690.1-201ENST00000418216 328 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 UQCRBP1-201ENST00000421129 336 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC004448.2-201ENST00000422360 586 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC009480.2-201ENST00000422916 432 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 DPYD-AS1-201ENST00000422980 533 ntTSL 3 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 PARP11-203ENST00000427057 4406 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AL031599.1-201ENST00000432694 808 ntTSL 3 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 Z85994.2-201ENST00000434327 452 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC073587.1-201ENST00000447093 876 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 FO393408.1-201ENST00000458577 582 ntTSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 SCARNA10-201ENST00000459255 330 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 ARHGEF3-AS1-202ENST00000495939 336 ntTSL 3 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 BACH1-IT1-201ENST00000504298 821 ntTSL 1 (best) BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC139713.2-213ENST00000505000 796 ntTSL 2 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC098799.3-201ENST00000506095 438 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 LINC02039-201ENST00000507428 566 ntTSL 4 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC019133.1-201ENST00000508292 420 ntTSL 3 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 LINC02200-202ENST00000508879 615 ntTSL 3 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC002456.2-201ENST00000509356 380 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 SNORA70.17-201ENST00000516449 133 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 HDAC2-AS2-209ENST00000519270 1244 ntTSL 4 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 RAB9BP1-201ENST00000519581 626 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC024681.2-201ENST00000523525 204 ntTSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 DUX4L52-201ENST00000549363 777 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 LINC02326-201ENST00000552028 540 ntTSL 3 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC026462.4-201ENST00000565229 951 ntTSL 3 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC007333.2-201ENST00000569998 559 ntTSL 4 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC069061.3-201ENST00000582254 823 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 MIR4715-201ENST00000584117 79 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 RPL12P25-202ENST00000598100 674 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC022387.2-201ENST00000604050 448 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 BX322635.1-201ENST00000605804 496 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC100847.1-201ENST00000611316 481 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 5S_rRNA.16-201ENST00000612928 119 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 SNX18P1Y-201ENST00000616231 511 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AL359757.1-201ENST00000623176 255 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AL118508.4-201ENST00000624142 1176 ntBASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 LINC00976-202ENST00000628064 534 ntTSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 GABRG2-217ENST00000639384 5360 ntTSL 5 BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 CASC1-202ENST00000354189 2445 ntAPPRIS ALT2 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC4.76□□□□□ -1.65
RFWD3Q6PCD5 AC092435.4-201ENST00000623012 4159 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 CNTN1-201ENST00000347616 5507 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 POSTN-210ENST00000541481 3113 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 HMCN1-201ENST00000271588 18208 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 FAM107B-229ENST00000622567 3510 ntAPPRIS P1 TSL 2 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 ING3-205ENST00000445699 1723 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 KIF21A-201ENST00000361418 5044 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 SPAG5-AS1-202ENST00000424210 1551 ntTSL 2 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RLIMP2-201ENST00000427891 1563 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 ROBO2-213ENST00000614793 7662 ntTSL 5 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 AC135352.1-201ENST00000506173 1418 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 CUL3-216ENST00000617432 1426 ntTSL 5 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 MGP-201ENST00000228938 694 ntTSL 3 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 C10orf120-201ENST00000329446 1064 ntAPPRIS P1 TSL 1 (best) BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RNU6-819P-201ENST00000364116 107 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RN7SKP224-201ENST00000364140 325 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RNU6-1263P-201ENST00000384601 106 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RNU6ATAC5P-201ENST00000388104 126 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RNA5SP372-201ENST00000390836 115 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 AC096644.3-201ENST00000416788 338 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 AL451070.1-201ENST00000430143 439 ntTSL 5 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 AC076966.1-201ENST00000435560 351 ntTSL 1 (best) BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 YWHAZP2-201ENST00000440317 728 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 BTBD7P2-201ENST00000441962 620 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 MRPL48P1-201ENST00000445390 636 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 BX119904.2-201ENST00000446495 512 ntTSL 2 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 TMEM212-AS1-201ENST00000449106 427 ntTSL 3 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 NPM1P39-201ENST00000449818 867 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 MTND2P28-201ENST00000457540 1044 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RNU6ATAC28P-201ENST00000459249 118 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 AC007000.3-201ENST00000459742 617 ntTSL 3 BASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 RPL7AP28-201ENST00000464513 571 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 ATP6V1G1P6-201ENST00000504007 334 ntBASIC4.75□□□□□ -1.65
RFWD3Q6PCD5 OR52Z1-201ENST00000510471 897 ntAPPRIS P1 BASIC4.75□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.4 ms