RNA–Protein interactions for RNA: ENST00000457540.1

MTND2P28-201, Transcript of MT-ND2 pseudogene 28, humanhuman

BASIC

Gene MTND2P28, Length 1,044 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTND2P28-201ENST00000457540 AEBP2Q6ZN18 517 aaPredicted RBP29.38■■■□□ 2.29
MTND2P28-201ENST00000457540 CHIC1Q5VXU3 224 aa28.02■■■□□ 2.08
MTND2P28-201ENST00000457540 SENP3Q9H4L4 574 aaPredicted RBP24.86■■□□□ 1.57
MTND2P28-201ENST00000457540 PHF23Q9BUL5 403 aaPredicted RBP24.67■■□□□ 1.54
MTND2P28-201ENST00000457540 FOXD1Q16676 465 aa23.26■■□□□ 1.31
MTND2P28-201ENST00000457540 PLPPR3Q6T4P5 718 aa22.44■■□□□ 1.18
MTND2P28-201ENST00000457540 PPP6R1Q9UPN7 881 aa21.98■■□□□ 1.11
MTND2P28-201ENST00000457540 ADRA2BP18089 450 aa21.91■■□□□ 1.1
MTND2P28-201ENST00000457540 PIAS4Q8N2W9 510 aaPredicted RBP21.75■■□□□ 1.07
MTND2P28-201ENST00000457540 MSH5O43196 834 aa21.54■■□□□ 1.04
MTND2P28-201ENST00000457540 POTEDQ86YR6 584 aa20.77■□□□□ 0.92
MTND2P28-201ENST00000457540 MAPK8IP2Q13387 824 aaPredicted RBP20.09■□□□□ 0.81
MTND2P28-201ENST00000457540 SCAF1Q9H7N4 1312 aaKnown RBP19.84■□□□□ 0.77
MTND2P28-201ENST00000457540 DMRT2Q9Y5R5 561 aa19.79■□□□□ 0.76
MTND2P28-201ENST00000457540 PPP4R3CPQ6ZMV5 832 aa19.76■□□□□ 0.75
MTND2P28-201ENST00000457540 CNKSR2Q8WXI2 1034 aa19.28■□□□□ 0.68
MTND2P28-201ENST00000457540 HOXD11P31277 338 aaPredicted RBP19.14■□□□□ 0.65
MTND2P28-201ENST00000457540 RNF216Q9NWF9 866 aaPredicted RBP19.04■□□□□ 0.64
MTND2P28-201ENST00000457540 DCAF8L1A6NGE4 600 aa19.02■□□□□ 0.64
MTND2P28-201ENST00000457540 NCBP3Q53F19 620 aaKnown RBP18.96■□□□□ 0.63
MTND2P28-201ENST00000457540 NPM3O75607 178 aaKnown RBP18.81■□□□□ 0.6
MTND2P28-201ENST00000457540 KCNA4P22459 653 aa18.7■□□□□ 0.58
MTND2P28-201ENST00000457540 RNF39Q9H2S5 420 aa18.48■□□□□ 0.55
MTND2P28-201ENST00000457540 CACNB1Q02641 598 aaPredicted RBP18.42■□□□□ 0.54
MTND2P28-201ENST00000457540 DNAJC5BQ9UF47 199 aa18.31■□□□□ 0.52
MTND2P28-201ENST00000457540 GRWD1Q9BQ67 446 aaKnown RBP eCLIP18.25■□□□□ 0.51
MTND2P28-201ENST00000457540 C1QBPQ07021 282 aaKnown RBP18.15■□□□□ 0.5
MTND2P28-201ENST00000457540 U3KPZ7 1027 aaPredicted RBP17.95■□□□□ 0.46
MTND2P28-201ENST00000457540 SLC4A2P04920 1241 aa17.94■□□□□ 0.46
MTND2P28-201ENST00000457540 SPINK5Q9NQ38 1064 aaPredicted RBP17.66■□□□□ 0.42
MTND2P28-201ENST00000457540 SLC4A1APQ9BWU0 796 aaKnown RBP17.64■□□□□ 0.41
MTND2P28-201ENST00000457540 CAPN15O75808 1086 aa17.55■□□□□ 0.4
MTND2P28-201ENST00000457540 DSG3P32926 999 aa17.4■□□□□ 0.38
MTND2P28-201ENST00000457540 TRHP20396 242 aaPredicted RBP17.35■□□□□ 0.37
MTND2P28-201ENST00000457540 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP17.34■□□□□ 0.37
MTND2P28-201ENST00000457540 HNRNPUL2Q1KMD3 747 aaKnown RBP17.34■□□□□ 0.37
MTND2P28-201ENST00000457540 MYCNP04198 464 aaPredicted RBP17.32■□□□□ 0.36
MTND2P28-201ENST00000457540 SAMD1Q6SPF0 538 aaPredicted RBP17.3■□□□□ 0.36
MTND2P28-201ENST00000457540 FOXD4L1Q9NU39 408 aa17.29■□□□□ 0.36
MTND2P28-201ENST00000457540 APLP2Q06481 763 aa17.26■□□□□ 0.35
MTND2P28-201ENST00000457540 ZBTB22O15209 634 aa17.25■□□□□ 0.35
MTND2P28-201ENST00000457540 ABCB7O75027 752 aa17.24■□□□□ 0.35
MTND2P28-201ENST00000457540 ZNF219Q9P2Y4 722 aaPredicted RBP17.22■□□□□ 0.35
MTND2P28-201ENST00000457540 ATF5Q9Y2D1 282 aaPredicted RBP17.06■□□□□ 0.32
MTND2P28-201ENST00000457540 POLA2Q14181 598 aa16.91■□□□□ 0.3
MTND2P28-201ENST00000457540 ATXN8OSP0DMR3 200 aa16.66■□□□□ 0.26
MTND2P28-201ENST00000457540 CSRNP3Q8WYN3 585 aa16.6■□□□□ 0.25
MTND2P28-201ENST00000457540 EHMT2Q96KQ7 1210 aa16.55■□□□□ 0.24
MTND2P28-201ENST00000457540 RBM42Q9BTD8 480 aaKnown RBP16.47■□□□□ 0.23
MTND2P28-201ENST00000457540 ZBTB12Q9Y330 459 aaPredicted RBP16.45■□□□□ 0.22
MTND2P28-201ENST00000457540 OSCARQ8IYS5 282 aa16.41■□□□□ 0.22
MTND2P28-201ENST00000457540 POTEHQ6S545 545 aa16.29■□□□□ 0.2
MTND2P28-201ENST00000457540 MKRN4PQ13434 485 aaPredicted RBP16.25■□□□□ 0.19
MTND2P28-201ENST00000457540 FBLN2P98095 1184 aa16.2■□□□□ 0.18
MTND2P28-201ENST00000457540 AKT1S1Q96B36 256 aa16.19■□□□□ 0.18
MTND2P28-201ENST00000457540 CHRDL2Q6WN34 429 aa16.12■□□□□ 0.17
MTND2P28-201ENST00000457540 REM2Q8IYK8 340 aaPredicted RBP16.1■□□□□ 0.17
MTND2P28-201ENST00000457540 SPDYE2BA6NHP3 402 aa16.02■□□□□ 0.16
MTND2P28-201ENST00000457540 SPDYE6P0CI01 402 aa16.02■□□□□ 0.16
MTND2P28-201ENST00000457540 SPDYE2Q495Y8 402 aa16.02■□□□□ 0.16
MTND2P28-201ENST00000457540 PITPNM1O00562 1244 aa15.95■□□□□ 0.14
MTND2P28-201ENST00000457540 ZNF692Q9BU19 519 aaPredicted RBP15.91■□□□□ 0.14
MTND2P28-201ENST00000457540 SSUH2Q9Y2M2 353 aa15.89■□□□□ 0.13
MTND2P28-201ENST00000457540 PIP4P2Q8N4L2 257 aa15.83■□□□□ 0.12
MTND2P28-201ENST00000457540 FXR2P51116 673 aaKnown RBP eCLIP15.73■□□□□ 0.11
MTND2P28-201ENST00000457540 CLEC11AQ9Y240 323 aa15.73■□□□□ 0.11
MTND2P28-201ENST00000457540 PABPN1Q86U42 306 aaKnown RBP eCLIP15.72■□□□□ 0.116e-17■□□□□ 9.2
MTND2P28-201ENST00000457540 SPDYE1Q8NFV5 336 aaPredicted RBP15.69■□□□□ 0.1
MTND2P28-201ENST00000457540 SPDYE4A6NLX3 237 aa15.53■□□□□ 0.08
MTND2P28-201ENST00000457540 PRKAR2AP13861 404 aaKnown RBP15.53■□□□□ 0.08
MTND2P28-201ENST00000457540 CHADLQ6NUI6 762 aa15.48■□□□□ 0.07
MTND2P28-201ENST00000457540 PRR29P0C7W0 189 aa15.45■□□□□ 0.06
MTND2P28-201ENST00000457540 HAX1O00165 279 aa15.44■□□□□ 0.06
MTND2P28-201ENST00000457540 EVX2Q03828 476 aa15.38■□□□□ 0.05
MTND2P28-201ENST00000457540 SP7Q8TDD2 431 aaPredicted RBP15.37■□□□□ 0.05
MTND2P28-201ENST00000457540 C19orf67A6NJJ6 358 aa15.22■□□□□ 0.03
MTND2P28-201ENST00000457540 STAG3Q9UJ98 1225 aa15.21■□□□□ 0.03
MTND2P28-201ENST00000457540 CREBZFQ9NS37 354 aa15.19■□□□□ 0.02
MTND2P28-201ENST00000457540 PROM2Q8N271 834 aa15.18■□□□□ 0.02
MTND2P28-201ENST00000457540 FARP1Q9Y4F1 1045 aaPredicted RBP15.18■□□□□ 0.02
MTND2P28-201ENST00000457540 CD44P16070 742 aaKnown RBP15.04■□□□□ -0
MTND2P28-201ENST00000457540 FKBP8Q14318 412 aa15.04■□□□□ -0
MTND2P28-201ENST00000457540 GABBR2O75899 941 aa14.97□□□□□ -0.01
MTND2P28-201ENST00000457540 MNX1P50219 401 aaPredicted RBP14.96□□□□□ -0.01
MTND2P28-201ENST00000457540 ZRANB1Q9UGI0 708 aa14.88□□□□□ -0.03
MTND2P28-201ENST00000457540 NPM1P06748 294 aaKnown RBP eCLIP14.8□□□□□ -0.04
MTND2P28-201ENST00000457540 ZNF579Q8NAF0 562 aaKnown RBP14.79□□□□□ -0.04
MTND2P28-201ENST00000457540 MIER1Q8N108 512 aa14.77□□□□□ -0.05
MTND2P28-201ENST00000457540 PHF12Q96QT6 1004 aa14.74□□□□□ -0.05
MTND2P28-201ENST00000457540 POTEIP0CG38 1075 aa14.71□□□□□ -0.05
MTND2P28-201ENST00000457540 PAK3O75914 559 aaPredicted RBP14.7□□□□□ -0.06
MTND2P28-201ENST00000457540 PLCD3Q8N3E9 789 aa14.69□□□□□ -0.06
MTND2P28-201ENST00000457540 GALR2O43603 387 aaPredicted RBP14.67□□□□□ -0.06
MTND2P28-201ENST00000457540 TSPYL2Q9H2G4 693 aaPredicted RBP14.66□□□□□ -0.06
MTND2P28-201ENST00000457540 PLEKHG5O94827 1062 aa14.63□□□□□ -0.07
MTND2P28-201ENST00000457540 CLCN6P51797 869 aa14.6□□□□□ -0.07
MTND2P28-201ENST00000457540 RASEFQ8IZ41 740 aa14.6□□□□□ -0.07
MTND2P28-201ENST00000457540 DCBLD2Q96PD2 775 aa14.55□□□□□ -0.08
MTND2P28-201ENST00000457540 CCDC61Q9Y6R9 512 aa14.55□□□□□ -0.08
MTND2P28-201ENST00000457540 MS4A3Q96HJ5 214 aa14.53□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 12.7 ms