RNA–Protein interactions for RNA: ENST00000380639.9

PTCD2-202, Transcript of pentatricopeptide repeat domain 2, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTCD2, Length 11,151 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD2-202ENST00000380639 MYT1Q01538 1121 aa8.44□□□□□ -1.06
PTCD2-202ENST00000380639 PELP1Q8IZL8 1130 aaKnown RBP8.23□□□□□ -1.09
PTCD2-202ENST00000380639 ERICH6Q7L0X2 663 aa7.95□□□□□ -1.14
PTCD2-202ENST00000380639 TTBK1Q5TCY1 1321 aaPredicted RBP7.95□□□□□ -1.14
PTCD2-202ENST00000380639 RANGAP1P46060 587 aaPredicted RBP7.79□□□□□ -1.16
PTCD2-202ENST00000380639 CCER1Q8TC90 406 aaPredicted RBP7.72□□□□□ -1.17
PTCD2-202ENST00000380639 YTHDC1Q96MU7 727 aaKnown RBP7.71□□□□□ -1.18
PTCD2-202ENST00000380639 DCAF8L2P0C7V8 631 aa7.47□□□□□ -1.21
PTCD2-202ENST00000380639 MYT1LQ9UL68 1186 aa7.46□□□□□ -1.22
PTCD2-202ENST00000380639 POLR3GLQ9BT43 218 aa7.32□□□□□ -1.24
PTCD2-202ENST00000380639 DAXXQ9UER7 740 aaPredicted RBP7.32□□□□□ -1.24
PTCD2-202ENST00000380639 EHMT2Q96KQ7 1210 aa7.3□□□□□ -1.24
PTCD2-202ENST00000380639 GLIPR1L2Q4G1C9 344 aa7.3□□□□□ -1.24
PTCD2-202ENST00000380639 CENPBP07199 599 aaPredicted RBP7.26□□□□□ -1.25
PTCD2-202ENST00000380639 RTL5Q5HYW3 569 aaPredicted RBP7.23□□□□□ -1.25
PTCD2-202ENST00000380639 NEFLP07196 543 aa7.2□□□□□ -1.26
PTCD2-202ENST00000380639 EIF5BO60841 1220 aaKnown RBP7.19□□□□□ -1.26
PTCD2-202ENST00000380639 ZNF316A6NFI3 1004 aaPredicted RBP7.08□□□□□ -1.28
PTCD2-202ENST00000380639 SLC24A1O60721 1099 aa7.06□□□□□ -1.28
PTCD2-202ENST00000380639 CLSPNQ9HAW4 1339 aa7.06□□□□□ -1.28
PTCD2-202ENST00000380639 FAM9AQ8IZU1 332 aaPredicted RBP7.05□□□□□ -1.28
PTCD2-202ENST00000380639 ATP1B4Q9UN42 357 aaPredicted RBP7□□□□□ -1.29
PTCD2-202ENST00000380639 ZNF326Q5BKZ1 582 aaKnown RBP7□□□□□ -1.29
PTCD2-202ENST00000380639 TNNT2P45379 298 aaPredicted RBP6.96□□□□□ -1.3
PTCD2-202ENST00000380639 CDK11BP21127 795 aaKnown RBP6.95□□□□□ -1.3
PTCD2-202ENST00000380639 CALRP27797 417 aaKnown RBP6.93□□□□□ -1.3
PTCD2-202ENST00000380639 AMER1Q5JTC6 1135 aaPredicted RBP6.92□□□□□ -1.3
PTCD2-202ENST00000380639 NCLP19338 710 aaKnown RBP6.87□□□□□ -1.31
PTCD2-202ENST00000380639 TRIM44Q96DX7 344 aaPredicted RBP6.86□□□□□ -1.31
PTCD2-202ENST00000380639 ANP32BQ92688 251 aaKnown RBP6.8□□□□□ -1.32
PTCD2-202ENST00000380639 ZEB1P37275 1124 aaPredicted RBP6.71□□□□□ -1.34
PTCD2-202ENST00000380639 MEX3CQ5U5Q3 659 aaKnown RBP6.7□□□□□ -1.34
PTCD2-202ENST00000380639 APPP05067 770 aa6.7□□□□□ -1.34
PTCD2-202ENST00000380639 A0A0U1RQG5 324 aaPredicted RBP6.69□□□□□ -1.34
PTCD2-202ENST00000380639 HAP1P54257 671 aaPredicted RBP6.68□□□□□ -1.34
PTCD2-202ENST00000380639 PTMSP20962 102 aa6.67□□□□□ -1.34
PTCD2-202ENST00000380639 CDK11AQ9UQ88 783 aaPredicted RBP6.67□□□□□ -1.34
PTCD2-202ENST00000380639 PCGF6Q9BYE7 350 aa6.66□□□□□ -1.34
PTCD2-202ENST00000380639 APLP2Q06481 763 aa6.66□□□□□ -1.34
PTCD2-202ENST00000380639 ARID3AQ99856 593 aa6.66□□□□□ -1.34
PTCD2-202ENST00000380639 ANP32EQ9BTT0 268 aa6.66□□□□□ -1.34
PTCD2-202ENST00000380639 ANP32AP39687 249 aaKnown RBP6.65□□□□□ -1.35
PTCD2-202ENST00000380639 STK11IPQ8N1F8 1099 aa6.64□□□□□ -1.35
PTCD2-202ENST00000380639 TNNT3P45378 269 aaPredicted RBP6.61□□□□□ -1.35
PTCD2-202ENST00000380639 ZNF526Q8TF50 670 aaPredicted RBP6.6□□□□□ -1.35
PTCD2-202ENST00000380639 ARID4BQ4LE39 1312 aaPredicted RBP6.6□□□□□ -1.35
PTCD2-202ENST00000380639 LAS1LQ9Y4W2 734 aaKnown RBP6.58□□□□□ -1.36
PTCD2-202ENST00000380639 ARXQ96QS3 562 aa6.57□□□□□ -1.36
PTCD2-202ENST00000380639 ZBTB47Q9UFB7 747 aaPredicted RBP6.56□□□□□ -1.36
PTCD2-202ENST00000380639 NAP1L5Q96NT1 182 aaPredicted RBP6.55□□□□□ -1.36
PTCD2-202ENST00000380639 C14orf37Q86TY3 774 aa6.55□□□□□ -1.36
PTCD2-202ENST00000380639 GOLGA6L22H0YM25 854 aa6.54□□□□□ -1.36
PTCD2-202ENST00000380639 LMOD2Q6P5Q4 547 aa6.53□□□□□ -1.36
PTCD2-202ENST00000380639 PODXL2Q9NZ53 605 aa6.53□□□□□ -1.36
PTCD2-202ENST00000380639 NEFMP07197 916 aa6.51□□□□□ -1.37
PTCD2-202ENST00000380639 NBR1Q14596 966 aa6.51□□□□□ -1.37
PTCD2-202ENST00000380639 NEFHP12036 1026 aa6.5□□□□□ -1.37
PTCD2-202ENST00000380639 HSP90AA1P07900 732 aaKnown RBP6.49□□□□□ -1.37
PTCD2-202ENST00000380639 NPM2Q86SE8 214 aaKnown RBP6.49□□□□□ -1.37
PTCD2-202ENST00000380639 BCANQ96GW7 911 aa6.49□□□□□ -1.37
PTCD2-202ENST00000380639 TRIM26Q12899 539 aaPredicted RBP6.48□□□□□ -1.37
PTCD2-202ENST00000380639 BCL11AQ9H165 835 aa6.48□□□□□ -1.37
PTCD2-202ENST00000380639 DNTTIP2Q5QJE6 756 aaKnown RBP6.48□□□□□ -1.37
PTCD2-202ENST00000380639 CNGB1Q14028 1251 aaPredicted RBP6.46□□□□□ -1.38
PTCD2-202ENST00000380639 RTN4Q9NQC3 1192 aaKnown RBP6.44□□□□□ -1.38
PTCD2-202ENST00000380639 SETQ01105 290 aaPredicted RBP6.43□□□□□ -1.38
PTCD2-202ENST00000380639 ANP32CO43423 234 aa6.42□□□□□ -1.38
PTCD2-202ENST00000380639 PNNQ9H307 717 aaKnown RBP6.42□□□□□ -1.38
PTCD2-202ENST00000380639 GOLGA6L1Q8N7Z2 621 aa6.42□□□□□ -1.38
PTCD2-202ENST00000380639 TAF7LQ5H9L4 462 aa6.41□□□□□ -1.38
PTCD2-202ENST00000380639 PTMAP06454 111 aaKnown RBP6.41□□□□□ -1.38
PTCD2-202ENST00000380639 ERICH6BQ5W0A0 696 aa6.41□□□□□ -1.38
PTCD2-202ENST00000380639 PATL2C9JE40 543 aaKnown RBP6.41□□□□□ -1.38
PTCD2-202ENST00000380639 WDR43Q15061 677 aaKnown RBP eCLIP6.41□□□□□ -1.38
PTCD2-202ENST00000380639 HOMEZQ8IX15 550 aa6.39□□□□□ -1.39
PTCD2-202ENST00000380639 NCBP3Q53F19 620 aaKnown RBP6.39□□□□□ -1.39
PTCD2-202ENST00000380639 CHAF1AQ13111 956 aaPredicted RBP6.39□□□□□ -1.39
PTCD2-202ENST00000380639 HMGB1P09429 215 aaKnown RBP6.37□□□□□ -1.39
PTCD2-202ENST00000380639 TULP1O00294 542 aaPredicted RBP6.37□□□□□ -1.39
PTCD2-202ENST00000380639 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.37□□□□□ -1.39
PTCD2-202ENST00000380639 SLC4A1APQ9BWU0 796 aaKnown RBP6.37□□□□□ -1.39
PTCD2-202ENST00000380639 GTF3C3Q9Y5Q9 886 aa6.37□□□□□ -1.39
PTCD2-202ENST00000380639 PPP1R1BQ9UD71 204 aaPredicted RBP6.36□□□□□ -1.39
PTCD2-202ENST00000380639 GOLGA6L6A8MZA4 724 aa6.35□□□□□ -1.39
PTCD2-202ENST00000380639 NEUROD1Q13562 356 aa6.35□□□□□ -1.39
PTCD2-202ENST00000380639 BCCIPQ9P287 314 aaKnown RBP eCLIP6.34□□□□□ -1.39
PTCD2-202ENST00000380639 CANXP27824 592 aaKnown RBP6.34□□□□□ -1.39
PTCD2-202ENST00000380639 TRIM41Q8WV44 630 aa6.34□□□□□ -1.39
PTCD2-202ENST00000380639 USP35Q9P2H5 1018 aa6.34□□□□□ -1.39
PTCD2-202ENST00000380639 GOLGA6L3A6NEY3 463 aa6.34□□□□□ -1.39
PTCD2-202ENST00000380639 SUPT5HO00267 1087 aaKnown RBP6.33□□□□□ -1.4
PTCD2-202ENST00000380639 TPRNQ4KMQ1 711 aa6.33□□□□□ -1.4
PTCD2-202ENST00000380639 PRM3Q9NNZ6 103 aa6.33□□□□□ -1.4
PTCD2-202ENST00000380639 UPF2Q9HAU5 1272 aaKnown RBP6.32□□□□□ -1.4
PTCD2-202ENST00000380639 NOC3LQ8WTT2 800 aaKnown RBP6.32□□□□□ -1.4
PTCD2-202ENST00000380639 GOLGA6L4A6NEF3 574 aa6.32□□□□□ -1.4
PTCD2-202ENST00000380639 PPM1GO15355 546 aaPredicted RBP6.31□□□□□ -1.4
PTCD2-202ENST00000380639 CLGNO14967 610 aa6.3□□□□□ -1.4
PTCD2-202ENST00000380639 TMX4Q9H1E5 349 aaPredicted RBP6.3□□□□□ -1.4
PTCD2-202ENST00000380639 VSIG10Q8N0Z9 540 aa6.3□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms