Protein–RNA interactions for Protein: P20849

COL9A1, Collagen alpha-1(IX) chain, humanhuman

Predictions only

Length 921 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1P20849 B3GALT5-202ENST00000380618 2763 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 HKR1-203ENST00000541583 2758 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 WDR95P-201ENST00000425638 1542 ntBASIC7.61□□□□□ -1.19
COL9A1P20849 CNTN4-202ENST00000397461 5198 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 MPPED2-201ENST00000358117 2405 ntAPPRIS P1 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 CTD-2201I18.1-202ENST00000514042 2705 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 GPR156-201ENST00000315843 4193 ntAPPRIS P3 TSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 NRP1-212ENST00000432372 4137 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 TLR3-202ENST00000504367 2310 ntTSL 2 BASIC7.61□□□□□ -1.19
COL9A1P20849 SAMD3-203ENST00000437477 2028 ntAPPRIS P1 TSL 5 BASIC7.61□□□□□ -1.19
COL9A1P20849 PEG10-202ENST00000482108 6618 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 VNN3-211ENST00000509351 1700 ntTSL 1 (best) BASIC7.61□□□□□ -1.19
COL9A1P20849 RIOK2-201ENST00000283109 3922 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 STAU1-210ENST00000614381 3054 ntAPPRIS ALT2 TSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 IMMTP1-201ENST00000435590 2219 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 ZNF396-201ENST00000306346 2788 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 AKAP7-202ENST00000342266 2461 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 LINC02312-201ENST00000555187 3046 ntTSL 2 BASIC7.6□□□□□ -1.19
COL9A1P20849 ZNF107-201ENST00000344930 5174 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 ETS1-202ENST00000392668 5139 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 HPS4-201ENST00000336873 3786 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 MACROD2-202ENST00000378058 4025 ntTSL 2 BASIC7.6□□□□□ -1.19
COL9A1P20849 CR1-206ENST00000400960 6959 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 MYOF-201ENST00000358334 6680 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 VNN2-201ENST00000326499 2118 ntAPPRIS P4 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 EPS15L1-214ENST00000602009 3915 ntTSL 2 BASIC7.6□□□□□ -1.19
COL9A1P20849 MORF4L2-208ENST00000441076 1828 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 AC023055.1-201ENST00000546837 1807 ntAPPRIS P1 TSL 2 BASIC7.6□□□□□ -1.19
COL9A1P20849 KRIT1-203ENST00000394505 3143 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 CYLD-210ENST00000566206 3104 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 TACC2-226ENST00000513429 4114 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 CTNND1-219ENST00000528621 5907 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 CTNND1-221ENST00000529873 5931 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 CTNND1-227ENST00000530748 5925 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 AL031123.2-201ENST00000563225 3325 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 Y_RNA.14-201ENST00000362415 103 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 RNU6-82P-201ENST00000363970 107 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 RNU6-662P-201ENST00000384253 104 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 Y_RNA.478-201ENST00000384358 107 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 MIR320B1-201ENST00000390209 79 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 TRBV6-6-201ENST00000390371 388 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
COL9A1P20849 TRBV19-201ENST00000390393 552 ntAPPRIS P1 BASIC7.6□□□□□ -1.19
COL9A1P20849 AL031679.1-201ENST00000400616 525 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AC093911.1-201ENST00000419129 552 ntTSL 4 BASIC7.6□□□□□ -1.19
COL9A1P20849 LINC01204-201ENST00000422047 639 ntTSL 3 BASIC7.6□□□□□ -1.19
COL9A1P20849 AC073283.2-202ENST00000426892 591 ntTSL 4 BASIC7.6□□□□□ -1.19
COL9A1P20849 RPL23AP4-201ENST00000427757 463 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 SNAP23P1-201ENST00000433229 246 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 LINC02238-202ENST00000436262 320 ntTSL 3 BASIC7.6□□□□□ -1.19
COL9A1P20849 AC110602.1-201ENST00000437414 318 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AL078587.1-201ENST00000448580 542 ntTSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 FGF12-AS3-201ENST00000452848 291 ntTSL 3 BASIC7.6□□□□□ -1.19
COL9A1P20849 AC007967.1-201ENST00000455422 1159 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AC011005.2-201ENST00000487324 359 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AC113367.2-201ENST00000505749 160 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AC112484.3-201ENST00000505910 329 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 RNU6-1038P-201ENST00000516516 104 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AP000435.1-201ENST00000528539 496 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AP000907.2-201ENST00000530827 353 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 LINC02306-201ENST00000546412 529 ntTSL 3 BASIC7.6□□□□□ -1.19
COL9A1P20849 DAZAP2-209ENST00000549732 601 ntTSL 2 BASIC7.6□□□□□ -1.19
COL9A1P20849 C14orf2-209ENST00000554880 707 ntAPPRIS P1 TSL 3 BASIC7.6□□□□□ -1.19
COL9A1P20849 AC092718.4-201ENST00000566639 716 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AC007599.2-201ENST00000573040 493 ntTSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 MIR4775-201ENST00000581168 75 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 LINC01906-201ENST00000582962 499 ntTSL 4 BASIC7.6□□□□□ -1.19
COL9A1P20849 AC008521.2-201ENST00000591021 259 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AC002128.2-201ENST00000604161 618 ntTSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 EIF3FP1-201ENST00000613970 806 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 AC068213.1-201ENST00000625124 226 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 MAP9-208ENST00000515654 2044 ntTSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 TNFSF15-201ENST00000374044 2789 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 ZNF445-202ENST00000425708 10052 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 YIPF4-201ENST00000238831 11949 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 LINC01091-204ENST00000515769 2204 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 SUPT7L-205ENST00000464789 2664 ntAPPRIS ALT1 TSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 ANKS1B-211ENST00000547776 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 GCSAM-201ENST00000308910 3336 ntAPPRIS P3 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 ANAPC1P1-201ENST00000426186 2145 ntBASIC7.6□□□□□ -1.19
COL9A1P20849 SMARCE1-208ENST00000474246 2124 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 KIF14-202ENST00000614960 6838 ntAPPRIS P1 TSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 PDE4DIP-203ENST00000369349 4677 ntTSL 1 (best) BASIC7.6□□□□□ -1.19
COL9A1P20849 TANC1-201ENST00000263635 7470 ntAPPRIS P1 TSL 5 BASIC7.6□□□□□ -1.19
COL9A1P20849 ACOT13-203ENST00000537591 4391 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 IL5RA-209ENST00000446632 2514 ntAPPRIS P4 TSL 5 BASIC7.59□□□□□ -1.19
COL9A1P20849 RAB21-201ENST00000261263 15546 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 SYTL4-204ENST00000372989 3885 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 PIGN-231ENST00000639174 4095 ntTSL 5 BASIC7.59□□□□□ -1.19
COL9A1P20849 MRPS23-201ENST00000313608 5621 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 ADGRF5-202ENST00000283296 5810 ntAPPRIS P1 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 EPB41-202ENST00000347529 2676 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 AL355103.1-201ENST00000557246 2226 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 METTL8-201ENST00000375258 8203 ntTSL 5 BASIC7.59□□□□□ -1.19
COL9A1P20849 ELP4-229ENST00000640961 8164 ntAPPRIS P2 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 IL16-201ENST00000302987 3999 ntAPPRIS P3 TSL 1 (best) BASIC7.59□□□□□ -1.19
COL9A1P20849 AC018880.1-201ENST00000418898 1319 ntBASIC7.59□□□□□ -1.19
COL9A1P20849 AL121835.2-201ENST00000624253 3502 ntBASIC7.59□□□□□ -1.19
COL9A1P20849 OR2H2-202ENST00000641840 3061 ntAPPRIS P1 BASIC7.59□□□□□ -1.19
COL9A1P20849 TMEM138-209ENST00000542946 2839 ntTSL 1 (best) BASIC7.59□□□□□ -1.19
Retrieved 100 of 98,524 protein–RNA pairs in 138.6 ms