Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 AC005303.1-201ENST00000607906 740 ntTSL 5 BASIC7.52□□□□□ -1.21
PHOX2BQ99453 AC090510.2-201ENST00000617465 629 ntBASIC7.52□□□□□ -1.21
PHOX2BQ99453 HNF1A-AS1-205ENST00000619441 343 ntTSL 3 BASIC7.52□□□□□ -1.21
PHOX2BQ99453 RMST_9.1-201ENST00000619945 193 ntBASIC7.52□□□□□ -1.21
PHOX2BQ99453 AL359757.2-201ENST00000624309 274 ntBASIC7.52□□□□□ -1.21
PHOX2BQ99453 CTSLP2-203ENST00000628708 493 ntTSL 5 BASIC7.52□□□□□ -1.21
PHOX2BQ99453 CRNDE-214ENST00000637011 865 ntTSL 5 BASIC7.52□□□□□ -1.21
PHOX2BQ99453 AL356585.10-201ENST00000641883 123 ntBASIC7.52□□□□□ -1.21
PHOX2BQ99453 MAP3K13-201ENST00000265026 9876 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.21
PHOX2BQ99453 MYO6-201ENST00000369975 5387 ntTSL 5 BASIC7.52□□□□□ -1.21
PHOX2BQ99453 DLG2-211ENST00000426717 5927 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PHOX2BQ99453 SLC14A1-201ENST00000321925 3971 ntAPPRIS P3 TSL 1 (best) BASIC7.52□□□□□ -1.21
PHOX2BQ99453 NT5C3A-202ENST00000381626 1909 ntAPPRIS ALT1 TSL 5 BASIC7.52□□□□□ -1.21
PHOX2BQ99453 MID1-212ENST00000616003 1926 ntTSL 1 (best) BASIC7.52□□□□□ -1.21
PHOX2BQ99453 ATP5A1P10-201ENST00000622403 1603 ntBASIC7.52□□□□□ -1.21
PHOX2BQ99453 EFTUD2-220ENST00000591382 3675 ntAPPRIS P1 TSL 2 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 BRS3-201ENST00000370648 2833 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 NAT10-201ENST00000257829 4002 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 CPA3-201ENST00000296046 1795 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 HYAL4-201ENST00000223026 2407 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC134882.1-201ENST00000603738 1676 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 PDE7A-202ENST00000396642 2986 ntTSL 2 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 CHIC1-201ENST00000373502 4158 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 RNF14-202ENST00000356143 3999 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 MAPK10-204ENST00000395157 2665 ntTSL 5 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 ZSCAN5A-201ENST00000391713 3562 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AL096816.1-201ENST00000623300 2920 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 PTPRD-204ENST00000397606 5038 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 PTPRD-211ENST00000486161 5039 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 SUPT3H-203ENST00000371460 2389 ntAPPRIS P4 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 CDADC1-201ENST00000251108 3386 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 OR1G1-201ENST00000328890 998 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 FAM205C-201ENST00000340783 983 ntAPPRIS ALT2 TSL 4 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 OR51B6-201ENST00000380219 939 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 MIR454-201ENST00000390180 115 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AL606923.1-201ENST00000406616 190 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AL353133.1-201ENST00000407695 401 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 MIR548K-201ENST00000408406 116 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 MIR548F4-201ENST00000408515 105 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 RPSAP60-201ENST00000415403 880 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC078883.1-203ENST00000416080 654 ntTSL 3 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC114482.1-201ENST00000418010 247 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC009276.1-201ENST00000422042 253 ntTSL 5 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 DUTP4-201ENST00000424782 475 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 OR10G8-201ENST00000431524 1045 ntAPPRIS P1 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 TXNP1-201ENST00000441872 371 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC245291.3-201ENST00000443400 292 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 RPL7L1P11-201ENST00000446092 721 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AL445991.1-201ENST00000450381 475 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 Y_RNA.653-201ENST00000459091 95 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 U8.20-201ENST00000459445 131 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 RN7SL233P-201ENST00000469988 277 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC117395.3-201ENST00000471176 680 ntTSL 4 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AP000893.1-201ENST00000474462 794 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC108043.1-201ENST00000512696 574 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC108471.1-201ENST00000513977 287 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC004053.1-201ENST00000515127 575 ntTSL 5 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 RNU6-976P-201ENST00000516086 111 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 RNA5SP287-201ENST00000516358 103 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 IGHV7-40-201ENST00000520963 296 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 ST13P6-201ENST00000522430 1102 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 ARL6IP1P3-201ENST00000524544 560 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC113192.4-201ENST00000534666 547 ntTSL 4 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC002115.1-201ENST00000589603 568 ntTSL 4 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC007938.3-201ENST00000604965 623 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC008555.7-201ENST00000605008 583 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AL592436.1-201ENST00000605135 558 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 AL513478.2-201ENST00000610400 988 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 TADA2A-212ENST00000620367 1043 ntTSL 5 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 MIR665-201ENST00000635949 72 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 FLJ42393-201ENST00000623801 2270 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 CTNND1-223ENST00000529986 5727 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 ZNF235-201ENST00000291182 3188 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 PDLIM5-201ENST00000317968 6083 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 DPH6-202ENST00000440392 3648 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 COL21A1-203ENST00000370819 4094 ntAPPRIS ALT1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 ZNF577-201ENST00000301399 3074 ntAPPRIS P3 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AP001267.1-201ENST00000531742 2074 ntTSL 2 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 MAPK10-319ENST00000641459 2542 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 IPO5-222ENST00000490680 3419 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 DDX42-203ENST00000457800 3323 ntTSL 5 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 AC145138.1-201ENST00000512908 2851 ntBASIC7.51□□□□□ -1.21
PHOX2BQ99453 LINC01876-209ENST00000638047 1983 ntTSL 5 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 MED13L-201ENST00000281928 14234 ntAPPRIS P1 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 ETS1-204ENST00000526145 3389 ntTSL 5 BASIC7.51□□□□□ -1.21
PHOX2BQ99453 RIF1-206ENST00000453091 8053 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 MTERF1-203ENST00000419292 3882 ntAPPRIS ALT2 TSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 LRRC77P-206ENST00000481578 2350 ntTSL 1 (best) BASIC7.51□□□□□ -1.21
PHOX2BQ99453 LRRC28-201ENST00000301981 5971 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 RBMS1-202ENST00000392753 3781 ntTSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 MAP3K7-201ENST00000369320 3328 ntTSL 5 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 TMEM27-201ENST00000380342 1578 ntAPPRIS P1 TSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 ZNF793-208ENST00000588578 4549 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 TRIQK-211ENST00000520430 1829 ntAPPRIS P1 TSL 2 BASIC7.5□□□□□ -1.21
PHOX2BQ99453 MYB-235ENST00000533624 1818 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 MYB-238ENST00000534044 1812 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 NELL2-217ENST00000551601 3148 ntTSL 1 (best) BASIC7.5□□□□□ -1.21
PHOX2BQ99453 MYOT-202ENST00000421631 1474 ntTSL 2 BASIC7.5□□□□□ -1.21
Retrieved 100 of 98,524 protein–RNA pairs in 84.7 ms