RNA–Protein interactions for RNA: ENST00000408406.1

MIR548K-201, Transcript of microRNA 548k, humanhuman

BASIC

Gene MIR548K, Length 116 nt, Biotype miRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MIR548K-201ENST00000408406 AEBP2Q6ZN18 517 aaPredicted RBP19.18■□□□□ 0.66
MIR548K-201ENST00000408406 CHIC1Q5VXU3 224 aa18.4■□□□□ 0.54
MIR548K-201ENST00000408406 SENP3Q9H4L4 574 aaPredicted RBP16.32■□□□□ 0.2
MIR548K-201ENST00000408406 PHF23Q9BUL5 403 aaPredicted RBP16.16■□□□□ 0.18
MIR548K-201ENST00000408406 FOXD1Q16676 465 aa15.21■□□□□ 0.03
MIR548K-201ENST00000408406 PLPPR3Q6T4P5 718 aa14.8□□□□□ -0.04
MIR548K-201ENST00000408406 PPP6R1Q9UPN7 881 aa14.38□□□□□ -0.11
MIR548K-201ENST00000408406 ADRA2BP18089 450 aa14.37□□□□□ -0.11
MIR548K-201ENST00000408406 PIAS4Q8N2W9 510 aaPredicted RBP14.27□□□□□ -0.13
MIR548K-201ENST00000408406 MSH5O43196 834 aa14.13□□□□□ -0.15
MIR548K-201ENST00000408406 POTEDQ86YR6 584 aa13.47□□□□□ -0.25
MIR548K-201ENST00000408406 MAPK8IP2Q13387 824 aaPredicted RBP13.14□□□□□ -0.31
MIR548K-201ENST00000408406 SCAF1Q9H7N4 1312 aaKnown RBP13.11□□□□□ -0.31
MIR548K-201ENST00000408406 PPP4R3CPQ6ZMV5 832 aa13.01□□□□□ -0.33
MIR548K-201ENST00000408406 DMRT2Q9Y5R5 561 aa12.97□□□□□ -0.33
MIR548K-201ENST00000408406 CNKSR2Q8WXI2 1034 aa12.7□□□□□ -0.38
MIR548K-201ENST00000408406 NCBP3Q53F19 620 aaKnown RBP12.56□□□□□ -0.4
MIR548K-201ENST00000408406 HOXD11P31277 338 aaPredicted RBP12.55□□□□□ -0.4
MIR548K-201ENST00000408406 RNF216Q9NWF9 866 aaPredicted RBP12.53□□□□□ -0.4
MIR548K-201ENST00000408406 DCAF8L1A6NGE4 600 aa12.51□□□□□ -0.41
MIR548K-201ENST00000408406 NPM3O75607 178 aaKnown RBP12.39□□□□□ -0.43
MIR548K-201ENST00000408406 KCNA4P22459 653 aa12.35□□□□□ -0.43
MIR548K-201ENST00000408406 RNF39Q9H2S5 420 aa12.07□□□□□ -0.48
MIR548K-201ENST00000408406 CACNB1Q02641 598 aaPredicted RBP12.04□□□□□ -0.48
MIR548K-201ENST00000408406 DNAJC5BQ9UF47 199 aa12.03□□□□□ -0.48
MIR548K-201ENST00000408406 GRWD1Q9BQ67 446 aaKnown RBP eCLIP12.02□□□□□ -0.49
MIR548K-201ENST00000408406 C1QBPQ07021 282 aaKnown RBP11.91□□□□□ -0.5
MIR548K-201ENST00000408406 SLC4A2P04920 1241 aa11.78□□□□□ -0.52
MIR548K-201ENST00000408406 U3KPZ7 1027 aaPredicted RBP11.77□□□□□ -0.53
MIR548K-201ENST00000408406 SLC4A1APQ9BWU0 796 aaKnown RBP11.7□□□□□ -0.54
MIR548K-201ENST00000408406 SPINK5Q9NQ38 1064 aaPredicted RBP11.56□□□□□ -0.56
MIR548K-201ENST00000408406 CAPN15O75808 1086 aa11.54□□□□□ -0.56
MIR548K-201ENST00000408406 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.49□□□□□ -0.57
MIR548K-201ENST00000408406 HNRNPUL2Q1KMD3 747 aaKnown RBP11.49□□□□□ -0.57
MIR548K-201ENST00000408406 MYCNP04198 464 aaPredicted RBP11.44□□□□□ -0.58
MIR548K-201ENST00000408406 APLP2Q06481 763 aa11.44□□□□□ -0.58
MIR548K-201ENST00000408406 SAMD1Q6SPF0 538 aaPredicted RBP11.44□□□□□ -0.58
MIR548K-201ENST00000408406 FOXD4L1Q9NU39 408 aa11.44□□□□□ -0.58
MIR548K-201ENST00000408406 TRHP20396 242 aaPredicted RBP11.41□□□□□ -0.58
MIR548K-201ENST00000408406 DSG3P32926 999 aa11.39□□□□□ -0.59
MIR548K-201ENST00000408406 ZBTB22O15209 634 aa11.35□□□□□ -0.59
MIR548K-201ENST00000408406 ZNF219Q9P2Y4 722 aaPredicted RBP11.35□□□□□ -0.59
MIR548K-201ENST00000408406 ABCB7O75027 752 aa11.3□□□□□ -0.6
MIR548K-201ENST00000408406 ATF5Q9Y2D1 282 aaPredicted RBP11.19□□□□□ -0.62
MIR548K-201ENST00000408406 POLA2Q14181 598 aa11.14□□□□□ -0.63
MIR548K-201ENST00000408406 ATXN8OSP0DMR3 200 aa11.04□□□□□ -0.64
MIR548K-201ENST00000408406 EHMT2Q96KQ7 1210 aa11.04□□□□□ -0.64
MIR548K-201ENST00000408406 CSRNP3Q8WYN3 585 aa11.01□□□□□ -0.65
MIR548K-201ENST00000408406 ZBTB12Q9Y330 459 aaPredicted RBP10.89□□□□□ -0.67
MIR548K-201ENST00000408406 RBM42Q9BTD8 480 aaKnown RBP10.84□□□□□ -0.67
MIR548K-201ENST00000408406 OSCARQ8IYS5 282 aa10.77□□□□□ -0.69
MIR548K-201ENST00000408406 FBLN2P98095 1184 aa10.73□□□□□ -0.69
MIR548K-201ENST00000408406 MKRN4PQ13434 485 aaPredicted RBP10.68□□□□□ -0.7
MIR548K-201ENST00000408406 AKT1S1Q96B36 256 aa10.64□□□□□ -0.71
MIR548K-201ENST00000408406 POTEHQ6S545 545 aa10.6□□□□□ -0.71
MIR548K-201ENST00000408406 SPDYE2BA6NHP3 402 aa10.57□□□□□ -0.72
MIR548K-201ENST00000408406 SPDYE6P0CI01 402 aa10.57□□□□□ -0.72
MIR548K-201ENST00000408406 SPDYE2Q495Y8 402 aa10.57□□□□□ -0.72
MIR548K-201ENST00000408406 REM2Q8IYK8 340 aaPredicted RBP10.56□□□□□ -0.72
MIR548K-201ENST00000408406 CHRDL2Q6WN34 429 aa10.55□□□□□ -0.72
MIR548K-201ENST00000408406 ZNF692Q9BU19 519 aaPredicted RBP10.52□□□□□ -0.73
MIR548K-201ENST00000408406 PITPNM1O00562 1244 aa10.45□□□□□ -0.74
MIR548K-201ENST00000408406 SSUH2Q9Y2M2 353 aa10.44□□□□□ -0.74
MIR548K-201ENST00000408406 CLEC11AQ9Y240 323 aa10.37□□□□□ -0.75
MIR548K-201ENST00000408406 PABPN1Q86U42 306 aaKnown RBP eCLIP10.36□□□□□ -0.75
MIR548K-201ENST00000408406 PIP4P2Q8N4L2 257 aa10.35□□□□□ -0.75
MIR548K-201ENST00000408406 SPDYE1Q8NFV5 336 aaPredicted RBP10.35□□□□□ -0.75
MIR548K-201ENST00000408406 FXR2P51116 673 aaKnown RBP eCLIP10.3□□□□□ -0.76
MIR548K-201ENST00000408406 SPDYE4A6NLX3 237 aa10.29□□□□□ -0.76
MIR548K-201ENST00000408406 PRR29P0C7W0 189 aa10.2□□□□□ -0.78
MIR548K-201ENST00000408406 PRKAR2AP13861 404 aaKnown RBP10.2□□□□□ -0.78
MIR548K-201ENST00000408406 HAX1O00165 279 aa10.14□□□□□ -0.79
MIR548K-201ENST00000408406 CHADLQ6NUI6 762 aa10.14□□□□□ -0.79
MIR548K-201ENST00000408406 STAG3Q9UJ98 1225 aa10.09□□□□□ -0.79
MIR548K-201ENST00000408406 SP7Q8TDD2 431 aaPredicted RBP10.02□□□□□ -0.81
MIR548K-201ENST00000408406 EVX2Q03828 476 aa10.01□□□□□ -0.81
MIR548K-201ENST00000408406 PROM2Q8N271 834 aa10.01□□□□□ -0.81
MIR548K-201ENST00000408406 FKBP8Q14318 412 aa10□□□□□ -0.81
MIR548K-201ENST00000408406 FARP1Q9Y4F1 1045 aaPredicted RBP9.99□□□□□ -0.81
MIR548K-201ENST00000408406 CREBZFQ9NS37 354 aa9.98□□□□□ -0.81
MIR548K-201ENST00000408406 C19orf67A6NJJ6 358 aa9.96□□□□□ -0.82
MIR548K-201ENST00000408406 CD44P16070 742 aaKnown RBP9.88□□□□□ -0.83
MIR548K-201ENST00000408406 NPM1P06748 294 aaKnown RBP eCLIP9.81□□□□□ -0.84
MIR548K-201ENST00000408406 MNX1P50219 401 aaPredicted RBP9.81□□□□□ -0.84
MIR548K-201ENST00000408406 MIER1Q8N108 512 aa9.81□□□□□ -0.84
MIR548K-201ENST00000408406 ZRANB1Q9UGI0 708 aa9.79□□□□□ -0.84
MIR548K-201ENST00000408406 GABBR2O75899 941 aa9.78□□□□□ -0.84
MIR548K-201ENST00000408406 PLEKHG5O94827 1062 aa9.77□□□□□ -0.85
MIR548K-201ENST00000408406 PLCD3Q8N3E9 789 aa9.76□□□□□ -0.85
MIR548K-201ENST00000408406 PAK3O75914 559 aaPredicted RBP9.74□□□□□ -0.85
MIR548K-201ENST00000408406 ZNF579Q8NAF0 562 aaKnown RBP9.71□□□□□ -0.86
MIR548K-201ENST00000408406 FBXO3Q9UK99 471 aa9.7□□□□□ -0.86
MIR548K-201ENST00000408406 TSPYL2Q9H2G4 693 aaPredicted RBP9.68□□□□□ -0.86
MIR548K-201ENST00000408406 PHF12Q96QT6 1004 aa9.67□□□□□ -0.86
MIR548K-201ENST00000408406 CLCN6P51797 869 aa9.64□□□□□ -0.87
MIR548K-201ENST00000408406 ZBTB47Q9UFB7 747 aaPredicted RBP9.63□□□□□ -0.87
MIR548K-201ENST00000408406 GALR2O43603 387 aaPredicted RBP9.61□□□□□ -0.87
MIR548K-201ENST00000408406 RASEFQ8IZ41 740 aa9.61□□□□□ -0.87
MIR548K-201ENST00000408406 VASPP50552 380 aaPredicted RBP9.59□□□□□ -0.87
MIR548K-201ENST00000408406 DCBLD2Q96PD2 775 aa9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms