Protein–RNA interactions for Protein: Q9Y6C5

PTCH2, Protein patched homolog 2, humanhuman

Predictions only

Length 1,203 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH2Q9Y6C5 DPP3P2-201ENST00000416030 1696 ntBASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 CIRBP-201ENST00000320936 1328 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 CIRBP-207ENST00000586472 1303 ntAPPRIS P3 TSL 3 BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 ISM2-207ENST00000493585 1739 ntTSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 GRAMD1A-201ENST00000317991 2695 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
PTCH2Q9Y6C5 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 PHACTR2-208ENST00000440869 2569 ntAPPRIS ALT2 TSL 2 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 CHODL-201ENST00000299295 2548 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 FAM19A3-201ENST00000361886 1056 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 AL645929.1-201ENST00000420084 975 ntBASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 PHB2-202ENST00000440277 996 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 VCX3B-203ENST00000444481 812 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 MVB12A-204ENST00000528515 686 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 NEK7-207ENST00000538004 1036 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 NEK4P2-201ENST00000580004 1012 ntBASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 MIR3180-1-201ENST00000580374 94 ntBASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 MIR3180-3-201ENST00000584616 94 ntBASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 VCX3A-203ENST00000612369 812 ntAPPRIS ALT2 TSL 5 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 TP53I11-223ENST00000627720 195 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 CCZ1B-201ENST00000316731 2885 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC22.02■■□□□ 1.12
PTCH2Q9Y6C5 POU2F2-215ENST00000560398 1788 ntTSL 5 BASIC22.02■■□□□ 1.11
PTCH2Q9Y6C5 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC22.02■■□□□ 1.11
PTCH2Q9Y6C5 SMG7-AS1-201ENST00000421703 2220 ntTSL 1 (best) BASIC22.02■■□□□ 1.11
PTCH2Q9Y6C5 UBE2B-201ENST00000265339 2515 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
PTCH2Q9Y6C5 CATSPER2-201ENST00000321596 1820 ntAPPRIS P3 TSL 5 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 KCNH1-214ENST00000640566 1365 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 GPRC5C-205ENST00000481232 1592 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 MCTP2-205ENST00000543482 1422 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 DPF1-206ENST00000420980 2227 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 COPE-201ENST00000262812 1141 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 TCEAL2-202ENST00000372780 1100 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 LINC01237-203ENST00000430555 843 ntTSL 4 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 AC099805.1-202ENST00000519927 1057 ntTSL 5 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 AL512357.1-201ENST00000557687 518 ntTSL 4 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 MTHFS-202ENST00000559722 948 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 PHGDH-210ENST00000641115 1638 ntBASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 ESX1-201ENST00000372588 1495 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 NRXN1-205ENST00000401710 2873 ntTSL 5 BASIC22.01■■□□□ 1.11
PTCH2Q9Y6C5 CAMK2B-207ENST00000358707 1895 ntTSL 1 (best) BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 B3GALT6-201ENST00000379198 2777 ntAPPRIS P1 BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 C2orf72-201ENST00000373640 3657 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 MRGPRF-203ENST00000441623 2282 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 P4HTM-202ENST00000383729 2127 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 TSSC2-201ENST00000450217 709 ntBASIC22■■□□□ 1.11
PTCH2Q9Y6C5 IFNL4P1-201ENST00000607083 540 ntBASIC22■■□□□ 1.11
PTCH2Q9Y6C5 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 ART1-201ENST00000250693 1312 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 OR13J1-201ENST00000377981 1339 ntAPPRIS P1 BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 FMNL2-201ENST00000288670 5575 ntAPPRIS P1 TSL 1 (best) BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC22■■□□□ 1.11
PTCH2Q9Y6C5 SLC18A3-201ENST00000374115 2420 ntAPPRIS P1 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 IRX4-201ENST00000231357 2221 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 TTYH1-201ENST00000301194 2088 ntAPPRIS ALT1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 LINC00565-201ENST00000562710 2331 ntBASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 PAQR6-202ENST00000335852 2117 ntTSL 2 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 HBZP1-201ENST00000354915 429 ntBASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 PSEN1-203ENST00000394157 1249 ntTSL 2 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 GLRB-205ENST00000512619 728 ntTSL 3 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 DRAP1-205ENST00000527119 581 ntTSL 5 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 RNPS1-224ENST00000569598 918 ntTSL 5 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 TBCB-205ENST00000585746 875 ntTSL 3 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 CHMP4A-211ENST00000609024 735 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 AL031008.1-201ENST00000619963 541 ntBASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 TBL1Y-202ENST00000355162 2376 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 UBTF-213ENST00000533177 3011 ntTSL 5 BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 TRIM67-203ENST00000449018 2166 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 ZACN-201ENST00000334586 1335 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
PTCH2Q9Y6C5 ZNF584-201ENST00000306910 2332 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 VRK2-207ENST00000440705 1676 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 SYTL1-211ENST00000618673 1712 ntTSL 5 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 WISP2-202ENST00000372865 1518 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 NME1-202ENST00000336097 986 ntTSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 NME1-203ENST00000393196 940 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 EMBP1-201ENST00000458200 901 ntBASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 AP003396.3-201ENST00000530918 778 ntTSL 5 BASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 AL160286.2-201ENST00000567150 934 ntBASIC21.98■■□□□ 1.11
PTCH2Q9Y6C5 LINC00092-202ENST00000580908 580 ntTSL 2 BASIC21.98■■□□□ 1.11
Retrieved 100 of 98,524 protein–RNA pairs in 22.5 ms