Protein–RNA interactions for Protein: Q9Y5Z7

HCFC2, Host cell factor 2, humanhuman

Predictions only

Length 792 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC2Q9Y5Z7 ACY1-206ENST00000476351 1409 ntTSL 3 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 TMEM110-MUSTN1-202ENST00000504329 1405 ntAPPRIS P1 TSL 5 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 LINC01024-205ENST00000521563 939 ntTSL 3 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 GRP-204ENST00000529320 824 ntAPPRIS ALT2 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 PACSIN3-211ENST00000539589 2009 ntAPPRIS P1 TSL 2 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
HCFC2Q9Y5Z7 HAUS3-202ENST00000443786 2430 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC2Q9Y5Z7 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC20.39■□□□□ 0.86
HCFC2Q9Y5Z7 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.86
HCFC2Q9Y5Z7 SSBP2-218ENST00000514493 1790 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC2Q9Y5Z7 FBXW7-202ENST00000281708 4976 ntAPPRIS P4 TSL 1 (best) BASIC20.39■□□□□ 0.86
HCFC2Q9Y5Z7 AKT1-211ENST00000554848 1595 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 KRT8P45-201ENST00000414328 1447 ntBASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 LCE4A-202ENST00000368777 672 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 NEURL2-201ENST00000372518 1278 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 C21orf91-202ENST00000400558 1090 ntTSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 MRPL53-202ENST00000409710 386 ntTSL 2 BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 AL132780.2-201ENST00000557615 1021 ntTSL 3 BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 CMTM3-210ENST00000565666 769 ntTSL 3 BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 PHACTR2-203ENST00000367584 2490 ntAPPRIS ALT2 TSL 5 BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 DMRTB1-201ENST00000371445 1910 ntAPPRIS P1 TSL 1 (best) BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC20.39■□□□□ 0.85
HCFC2Q9Y5Z7 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 JPT1-203ENST00000409753 1605 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 SLC36A1-209ENST00000521925 1621 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 KRT8P41-201ENST00000533985 1514 ntBASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 CCNC-207ENST00000518714 1426 ntTSL 5 BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 RUNDC3B-207ENST00000493037 2020 ntAPPRIS ALT2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 KCNMB3-202ENST00000349697 1228 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 HCG4P8-203ENST00000443049 980 ntBASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 RNF187-203ENST00000639044 708 ntAPPRIS P2 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 SMPDL3A-203ENST00000539041 1755 ntTSL 2 BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 CALHM3-201ENST00000369783 1652 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
HCFC2Q9Y5Z7 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 SPAG4-201ENST00000374273 1453 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 BIN1-203ENST00000346226 2401 ntAPPRIS ALT2 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 KRT17-205ENST00000540235 1438 ntTSL 5 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 PCCB-208ENST00000468777 1877 ntAPPRIS ALT2 TSL 3 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 IL15-208ENST00000529613 1355 ntAPPRIS P1 TSL 5 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 WDSUB1-203ENST00000392796 1812 ntAPPRIS P1 TSL 2 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 SPRN-201ENST00000414069 3128 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 IFT27-201ENST00000340630 1113 ntAPPRIS P3 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 MUC1-204ENST00000343256 648 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 AANAT-202ENST00000392492 1005 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 AL450487.1-201ENST00000426799 995 ntBASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 CR769775.1-204ENST00000439760 747 ntTSL 5 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 PTK2-216ENST00000519881 863 ntTSL 3 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 TMEM206-205ENST00000535273 2119 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 MRPL46-202ENST00000558531 1002 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 CHRNB1-207ENST00000575379 1095 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 DHRS2-210ENST00000611765 1287 ntAPPRIS ALT2 TSL 2 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 SETD3-209ENST00000630307 1281 ntTSL 5 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 MEDAG-201ENST00000380482 2374 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 AP001271.2-201ENST00000624018 1556 ntBASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 AC073188.6-202ENST00000616616 2281 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 AC009126.1-201ENST00000501338 2245 ntTSL 2 BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 CREB3-201ENST00000353704 1832 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 PUF60-203ENST00000453551 1842 ntTSL 1 (best) BASIC20.37■□□□□ 0.85
HCFC2Q9Y5Z7 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 JAKMIP1-203ENST00000409371 2420 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 MYL5-206ENST00000506838 2956 ntTSL 2 BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 ZNF669-201ENST00000343381 1951 ntAPPRIS P3 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 TLCD1-201ENST00000292090 1017 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 COMTD1-201ENST00000372538 976 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 TBC1D7-205ENST00000379307 1084 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 TMEM243-203ENST00000433078 1273 ntAPPRIS P1 TSL 2 BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 AC005091.1-201ENST00000441955 1190 ntTSL 3 BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 AGBL5-AS1-201ENST00000444217 407 ntTSL 5 BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 CD81-212ENST00000526072 1172 ntTSL 5 BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 AP1S2-206ENST00000545766 576 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 AC069148.1-201ENST00000608741 768 ntBASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 VAV3-202ENST00000370056 4990 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 CIZ1-206ENST00000372954 2731 ntAPPRIS ALT2 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 PDS5A-202ENST00000503396 2685 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 STARD4-203ENST00000502322 1467 ntTSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 SNX32-201ENST00000308342 2003 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
HCFC2Q9Y5Z7 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 HOXA10-201ENST00000283921 2541 ntAPPRIS P2 TSL 1 (best) BASIC20.35■□□□□ 0.85
HCFC2Q9Y5Z7 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms