Protein–RNA interactions for Protein: Q9Y2X8

UBE2D4, Ubiquitin-conjugating enzyme E2 D4, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D4Q9Y2X8 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 PSPC1-206ENST00000619300 2013 ntAPPRIS P1 TSL 5 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 TUBG1-201ENST00000251413 1611 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 TNPO2-203ENST00000450764 4993 ntAPPRIS ALT1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 TEX21P-204ENST00000641479 1693 ntBASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 MTDH-203ENST00000519934 2184 ntTSL 5 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 RNH1-206ENST00000438658 1725 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 SOCS2-210ENST00000551556 1716 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 CPZ-202ENST00000360986 2267 ntAPPRIS ALT2 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 USP48-204ENST00000400301 4309 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 EDA-209ENST00000525810 843 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 EDA-210ENST00000527388 927 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 AL845552.2-201ENST00000553301 553 ntTSL 4 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 AC106738.2-202ENST00000558156 533 ntTSL 4 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 MIF4GD-211ENST00000580571 952 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 ATP10A-207ENST00000619904 988 ntTSL 5 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 PDLIM2-204ENST00000397760 1847 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 SNAP47-201ENST00000315781 2367 ntAPPRIS P3 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 CCDC50-202ENST00000392456 2454 ntAPPRIS P4 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 AC091729.3-201ENST00000423008 1401 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 PQLC2-203ENST00000400548 1548 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 EGFR-204ENST00000420316 1570 ntTSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC13.54□□□□□ -0.24
UBE2D4Q9Y2X8 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 SLC2A11-204ENST00000398356 2388 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 GALNT2-201ENST00000366672 4454 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 SMTN-204ENST00000404574 1735 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 WDR34-201ENST00000372715 1755 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 SHE-201ENST00000304760 6243 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 RASGRP2-203ENST00000377486 667 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 GDNF-203ENST00000381826 778 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 CCDC74B-205ENST00000409943 1296 ntAPPRIS ALT2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 GDNF-204ENST00000427982 856 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 KRT18P11-201ENST00000435214 1283 ntBASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 CDKN3-204ENST00000442975 727 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 PPM1N-207ENST00000451287 1293 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 RASGEF1B-208ENST00000510780 539 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 RASGEF1B-209ENST00000512343 498 ntTSL 3 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 AC005697.1-201ENST00000582441 582 ntAPPRIS P1 TSL 4 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 TMEM131-201ENST00000186436 6640 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 CT47B1-201ENST00000371311 1328 ntAPPRIS P1 TSL 5 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 WDR37-203ENST00000381329 1307 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 AC005082.1-201ENST00000413042 2259 ntBASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 ITGB5-201ENST00000296181 4372 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 C3orf18-205ENST00000441239 1490 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC13.53□□□□□ -0.24
UBE2D4Q9Y2X8 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 SIGLEC14-201ENST00000360844 2035 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 RTEL1-204ENST00000370003 2273 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 AC007613.1-201ENST00000572811 2597 ntBASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 DACH1-202ENST00000613252 5233 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.24
UBE2D4Q9Y2X8 GGTLC1-202ENST00000286890 1028 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 UBE2C-203ENST00000352551 665 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 PYY-201ENST00000360085 1053 ntAPPRIS P2 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 CCDC160-201ENST00000370809 1299 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 ARL6IP4-205ENST00000412505 818 ntTSL 5 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 FAM47E-204ENST00000510328 1002 ntAPPRIS ALT2 TSL 2 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 ORAI3-202ENST00000562699 628 ntTSL 2 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 ELAC1-204ENST00000591429 975 ntTSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 CYP2T3P-201ENST00000601990 817 ntBASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 STEAP1-201ENST00000297205 1313 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 AC079598.2-202ENST00000546624 1451 ntBASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 AC018553.1-201ENST00000616682 1458 ntBASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC13.52□□□□□ -0.25
UBE2D4Q9Y2X8 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC13.52□□□□□ -0.25
Retrieved 100 of 98,524 protein–RNA pairs in 33.7 ms