Protein–RNA interactions for Protein: Q9Y2J0

RPH3A, Rabphilin-3A, humanhuman

Predicted RBP Predictions only

Length 694 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RPH3AQ9Y2J0 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPH3AQ9Y2J0 ASB16-201ENST00000293414 2139 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPH3AQ9Y2J0 BEST4-201ENST00000372207 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.45
RPH3AQ9Y2J0 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 ANKRD54-204ENST00000411961 946 ntTSL 5 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 SMAGP-206ENST00000604188 433 ntTSL 3 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 AC004264.1-201ENST00000608354 794 ntBASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 UAP1-201ENST00000271469 2377 ntAPPRIS ALT1 TSL 5 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 LINC00304-201ENST00000321214 2243 ntTSL 2 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 AP001271.2-201ENST00000624018 1556 ntBASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC17.83■□□□□ 0.44
RPH3AQ9Y2J0 PDLIM5-205ENST00000380180 2020 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 ZNF771-201ENST00000319296 2371 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 FAM98C-201ENST00000252530 1271 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 MIR718-201ENST00000390190 70 ntBASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 GPSM1-203ENST00000392944 1111 ntTSL 3 BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 YBEY-205ENST00000397694 534 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 TNFRSF18-204ENST00000486728 727 ntAPPRIS ALT2 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 AC090877.2-202ENST00000560363 574 ntTSL 2 BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 REXO1L12P-201ENST00000622156 912 ntBASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 REST-211ENST00000640168 1268 ntTSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 GALNS-201ENST00000268695 2363 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 MMP28-201ENST00000605424 1928 ntAPPRIS P3 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 MACROD2-201ENST00000217246 4994 ntAPPRIS P1 TSL 2 BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC17.82■□□□□ 0.44
RPH3AQ9Y2J0 EPS8L1-201ENST00000201647 2536 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 ZDHHC18-202ENST00000374142 5020 ntAPPRIS P2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 TRIM58-201ENST00000366481 3225 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 SUSD2-201ENST00000358321 3404 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 FUZ-201ENST00000313777 1675 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 COMMD7-202ENST00000446419 1343 ntAPPRIS ALT1 TSL 2 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 TMEM179-206ENST00000616017 1645 ntBASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 MCRIP1-201ENST00000455127 1209 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 AC007161.3-201ENST00000469183 637 ntTSL 5 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 JOSD2-202ENST00000595669 733 ntTSL 2 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 ZIM2-206ENST00000599935 2226 ntAPPRIS P1 TSL 5 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 RNF32-208ENST00000432459 1893 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 KLC1-208ENST00000452929 2453 ntTSL 5 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 CASP6-201ENST00000265164 1548 ntAPPRIS P1 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 LBX2-AS1-202ENST00000603175 2083 ntBASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC17.81■□□□□ 0.44
RPH3AQ9Y2J0 C17orf62-204ENST00000437807 2242 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 ODF3L2-202ENST00000382696 1393 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 PITPNB-205ENST00000455418 2963 ntAPPRIS ALT1 TSL 5 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 WIPF2-202ENST00000394103 2378 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 CADPS2-202ENST00000334010 6045 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 SUDS3-204ENST00000543473 4897 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 KRT16P5-201ENST00000455284 522 ntBASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 AC010531.1-201ENST00000568879 953 ntAPPRIS P1 TSL 4 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 FLT3LG-211ENST00000600429 984 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 RNH1-203ENST00000397604 1722 ntAPPRIS P1 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 NXNL2-202ENST00000375855 1457 ntTSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 GOLGA6L3-201ENST00000507199 1679 ntBASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC17.8■□□□□ 0.44
RPH3AQ9Y2J0 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 BCR-201ENST00000305877 7082 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 AC007952.6-201ENST00000573168 2673 ntBASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 AC003957.1-201ENST00000625108 2673 ntBASIC17.79■□□□□ 0.44
RPH3AQ9Y2J0 RTN4RL2-201ENST00000335099 2203 ntAPPRIS P1 TSL 1 (best) BASIC17.79■□□□□ 0.44
Retrieved 100 of 98,524 protein–RNA pairs in 25.4 ms