Protein–RNA interactions for Protein: Q9NRF9

POLE3, DNA polymerase epsilon subunit 3, humanhuman

Predictions only

Length 147 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLE3Q9NRF9 MAP2K2-202ENST00000394867 1471 ntTSL 5 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 HEMK1-206ENST00000455834 1499 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 TP73-202ENST00000354437 2140 ntTSL 5 BASIC18.07■□□□□ 0.48
POLE3Q9NRF9 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 OSR2-202ENST00000435298 1736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 FBXL12-205ENST00000586651 1736 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 SLC6A17-201ENST00000331565 6427 ntAPPRIS P1 TSL 2 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 PTEN-201ENST00000371953 9027 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 AL355802.2-201ENST00000402069 882 ntBASIC18.06■□□□□ 0.48
POLE3Q9NRF9 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 HLA-L-209ENST00000420110 1011 ntBASIC18.06■□□□□ 0.48
POLE3Q9NRF9 SLC47A1P1-201ENST00000420951 500 ntTSL 5 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 CENPS-CORT-202ENST00000465026 494 ntTSL 3 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 PIGQ-209ENST00000470411 2112 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 CENPS-CORT-203ENST00000470413 626 ntTSL 2 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 LIME1-205ENST00000480139 819 ntAPPRIS ALT2 TSL 3 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 UNC93B4-201ENST00000505679 747 ntBASIC18.06■□□□□ 0.48
POLE3Q9NRF9 CES1P1-204ENST00000574030 877 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 ART5-203ENST00000397068 1504 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 NFIB-207ENST00000397579 3129 ntTSL 5 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 PDLIM2-207ENST00000409417 1487 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 MAP3K15-201ENST00000338883 4012 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 BACE1-204ENST00000445823 1408 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
POLE3Q9NRF9 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 KRT78-201ENST00000304620 1778 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 AC007952.6-201ENST00000573168 2673 ntBASIC18.05■□□□□ 0.48
POLE3Q9NRF9 AC003957.1-201ENST00000625108 2673 ntBASIC18.05■□□□□ 0.48
POLE3Q9NRF9 THAP7-201ENST00000215742 1213 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 ID1-201ENST00000376105 1233 ntBASIC18.05■□□□□ 0.48
POLE3Q9NRF9 AC114730.1-201ENST00000400768 472 ntTSL 4 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 HAGLROS-201ENST00000426615 1121 ntTSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 FAM208B-201ENST00000328090 8626 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 LDHAL6A-202ENST00000396213 1716 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 DOCK9-206ENST00000427887 4176 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 ZSWIM8-213ENST00000603114 5919 ntTSL 5 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 KCNK4-201ENST00000394525 1673 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 LIMS2-204ENST00000409286 1678 ntTSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 GOLGA6L3-201ENST00000507199 1679 ntBASIC18.05■□□□□ 0.48
POLE3Q9NRF9 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 Z82202.1-201ENST00000623446 1880 ntBASIC18.05■□□□□ 0.48
POLE3Q9NRF9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 CERS6-201ENST00000305747 7217 ntAPPRIS P3 TSL 2 BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
POLE3Q9NRF9 ANTXR1-203ENST00000409829 2221 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 AZIN1-201ENST00000337198 4721 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 SGCE-207ENST00000447873 1597 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 PAXIP1-202ENST00000404141 3827 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 SLC38A8-201ENST00000299709 1308 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 TACO1-201ENST00000258975 1469 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 RABEPK-204ENST00000394125 1466 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 CEACAM3-201ENST00000344550 1022 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 DGCR6L-202ENST00000405465 962 ntTSL 3 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 UNC93B5-201ENST00000530315 699 ntBASIC18.04■□□□□ 0.48
POLE3Q9NRF9 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 KLF2-202ENST00000592003 564 ntTSL 3 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 TIMM50-213ENST00000599794 786 ntTSL 2 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 NCBP2-AS2-201ENST00000602845 918 ntAPPRIS P1 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 GRM5-202ENST00000305447 4571 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 PHLDA3-202ENST00000367311 2640 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 AC087482.1-204ENST00000636067 2431 ntTSL 5 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 FAM46A-203ENST00000369756 5537 ntAPPRIS ALT2 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 DAG1-219ENST00000538711 5582 ntAPPRIS P1 TSL 5 BASIC18.04■□□□□ 0.48
POLE3Q9NRF9 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC18.03■□□□□ 0.48
POLE3Q9NRF9 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC18.03■□□□□ 0.48
POLE3Q9NRF9 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
POLE3Q9NRF9 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC18.03■□□□□ 0.48
POLE3Q9NRF9 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC18.03■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 46.4 ms