Protein–RNA interactions for Protein: Q9H8Y1

VRTN, Vertnin, humanhuman

Predictions only

Length 702 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VRTNQ9H8Y1 C7orf50-201ENST00000357429 1294 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 RHOC-203ENST00000369632 1026 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 Z85996.1-201ENST00000494644 937 ntBASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 MRPL36-202ENST00000505059 610 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 PENK-204ENST00000518770 863 ntTSL 2 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 CDIPT-204ENST00000563415 1047 ntTSL 3 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 CR392000.1-201ENST00000624770 1228 ntBASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 AL031985.4-201ENST00000642138 673 ntBASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 YTHDF3-213ENST00000621820 2363 ntTSL 2 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 RBP4-202ENST00000371467 1314 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 EYA2-202ENST00000327619 2702 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 RASGRP2-211ENST00000394432 2304 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
VRTNQ9H8Y1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 ADGRB1-202ENST00000517894 6241 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 FAM3A-215ENST00000447601 1800 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 LCE2B-201ENST00000368780 612 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 CTNNBIP1-204ENST00000400904 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 AMN1-211ENST00000541931 880 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 LINC02167-201ENST00000562769 594 ntTSL 3 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 MIR4497-201ENST00000583208 89 ntBASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 IMPA2-208ENST00000589238 923 ntTSL 3 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 FBXO27-207ENST00000600828 1557 ntAPPRIS ALT1 TSL 5 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 SYTL1-201ENST00000318074 1900 ntTSL 2 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 MAGI2-212ENST00000626691 4599 ntTSL 5 BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
VRTNQ9H8Y1 C3orf18-203ENST00000426034 2486 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 RBM6-204ENST00000422955 2324 ntTSL 2 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 FAM46B-201ENST00000289166 2368 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 COX7A1-201ENST00000292907 762 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 RAP1B-203ENST00000378985 1017 ntTSL 2 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 CDKN1B-202ENST00000396340 897 ntTSL 3 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 LINC01122-201ENST00000422723 675 ntTSL 3 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 NME6-209ENST00000442597 757 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 AC116562.2-201ENST00000507042 360 ntBASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 NUDT16P1-203ENST00000513809 620 ntBASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 RAP1B-221ENST00000540209 1264 ntTSL 2 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 PEX16-210ENST00000532681 1639 ntTSL 3 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 TXNL1-211ENST00000590954 1339 ntAPPRIS P1 TSL 2 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 TUBA8-201ENST00000316027 1518 ntTSL 2 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 PLEKHH3-201ENST00000293349 2987 ntAPPRIS ALT1 TSL 5 BASIC20.73■□□□□ 0.91
VRTNQ9H8Y1 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 TP73-202ENST00000354437 2140 ntTSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 RAC1-201ENST00000348035 2323 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 SMARCD2-212ENST00000613943 2342 ntTSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 TPCN2-209ENST00000637504 2736 ntTSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 CCDC107-202ENST00000378406 1016 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 TMSB4X-201ENST00000380633 495 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 AC005943.1-201ENST00000585937 1002 ntAPPRIS P1 TSL 3 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 KAZN-209ENST00000636564 1197 ntTSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 PDZRN4-202ENST00000402685 3347 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 GTF3C5-201ENST00000342018 1905 ntTSL 5 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 BX005266.2-202ENST00000446626 2245 ntTSL 1 (best) BASIC20.72■□□□□ 0.91
VRTNQ9H8Y1 Z82202.1-201ENST00000623446 1880 ntBASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 LINC01465-201ENST00000408887 1940 ntBASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 MSGN1-201ENST00000281047 606 ntAPPRIS P1 BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 MESTP1-201ENST00000404287 994 ntBASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 AL596275.1-201ENST00000423464 877 ntBASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 AL357874.1-201ENST00000428948 574 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 ASH1L-AS1-202ENST00000456633 911 ntTSL 2 BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 SNORA78-201ENST00000459373 127 ntBASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 MIR4785-201ENST00000585005 73 ntBASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 PRKACA-209ENST00000590853 1101 ntTSL 5 BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 AC026471.5-201ENST00000615068 467 ntBASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
VRTNQ9H8Y1 AL390860.1-201ENST00000449298 1541 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 22.9 ms