Protein–RNA interactions for Protein: Q9H269

VPS16, Vacuolar protein sorting-associated protein 16 homolog, humanhuman

Predictions only

Length 839 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS16Q9H269 AC026185.1-201ENST00000445748 174 ntBASIC21.37■■□□□ 1.01
VPS16Q9H269 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 NPR3-204ENST00000434067 2715 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS16Q9H269 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 SLC1A6-210ENST00000600144 1735 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 UBP1-202ENST00000283629 4148 ntAPPRIS P3 TSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 ASB6-202ENST00000277459 2180 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 ST3GAL3-206ENST00000351035 2377 ntTSL 5 BASIC21.37■■□□□ 1.01
VPS16Q9H269 GALNT16-204ENST00000553669 1629 ntTSL 1 (best) BASIC21.37■■□□□ 1.01
VPS16Q9H269 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 SERPINB6-204ENST00000380529 1370 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VPS16Q9H269 TMEM91-203ENST00000392002 1389 ntAPPRIS P1 TSL 2 BASIC21.36■■□□□ 1.01
VPS16Q9H269 AL049812.1-201ENST00000432563 2267 ntBASIC21.36■■□□□ 1.01
VPS16Q9H269 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 AP2M1-203ENST00000411763 1577 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS16Q9H269 EFS-201ENST00000216733 3118 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 ZNF707-202ENST00000418203 2661 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
VPS16Q9H269 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 PRPF39-201ENST00000355765 2868 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 TRPC1-203ENST00000476941 3061 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS16Q9H269 AL161938.1-201ENST00000569833 2180 ntBASIC21.36■■□□□ 1.01
VPS16Q9H269 CNIH4-203ENST00000366858 702 ntTSL 3 BASIC21.36■■□□□ 1.01
VPS16Q9H269 METTL15-202ENST00000403099 795 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS16Q9H269 AL390719.1-204ENST00000412397 1219 ntBASIC21.36■■□□□ 1.01
VPS16Q9H269 CROCCP5-201ENST00000436658 830 ntBASIC21.36■■□□□ 1.01
VPS16Q9H269 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 ALDH3A2-224ENST00000626500 995 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS16Q9H269 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS16Q9H269 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC21.36■■□□□ 1.01
VPS16Q9H269 CFAP77-203ENST00000393216 1638 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 PCBP3-206ENST00000400314 2202 ntAPPRIS P2 TSL 5 BASIC21.36■■□□□ 1.01
VPS16Q9H269 KRT8-217ENST00000619952 2437 ntTSL 2 BASIC21.36■■□□□ 1.01
VPS16Q9H269 AGTR1-201ENST00000349243 2356 ntAPPRIS P1 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 LDHD-202ENST00000450168 1966 ntAPPRIS ALT2 TSL 1 (best) BASIC21.36■■□□□ 1.01
VPS16Q9H269 CRK-204ENST00000574295 1391 ntTSL 5 BASIC21.36■■□□□ 1.01
VPS16Q9H269 SMARCC2-203ENST00000394023 4271 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 MAF1-201ENST00000322428 1677 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 PDLIM2-205ENST00000397761 1491 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
VPS16Q9H269 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 RPH3A-203ENST00000543106 2581 ntAPPRIS ALT2 TSL 2 BASIC21.35■■□□□ 1.01
VPS16Q9H269 AC124283.5-201ENST00000624661 1809 ntBASIC21.35■■□□□ 1.01
VPS16Q9H269 AL645608.9-201ENST00000442292 829 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 NME6-213ENST00000451657 871 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS16Q9H269 AC005829.2-201ENST00000571422 1056 ntBASIC21.35■■□□□ 1.01
VPS16Q9H269 CIRBP-214ENST00000587896 1081 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS16Q9H269 YIF1B-213ENST00000591755 1077 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS16Q9H269 SUPT4H1-202ENST00000577396 1643 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS16Q9H269 TMEM41B-207ENST00000611268 1440 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 GOLGA3-203ENST00000456883 5496 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC21.35■■□□□ 1.01
VPS16Q9H269 SAMD14-203ENST00000503131 1938 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 ALDH7A1-215ENST00000553117 1935 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS16Q9H269 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 PPP2R5A-201ENST00000261461 3128 ntAPPRIS P1 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 DPP10-203ENST00000393147 2758 ntAPPRIS ALT2 TSL 1 (best) BASIC21.35■■□□□ 1.01
VPS16Q9H269 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC21.35■■□□□ 1.01
VPS16Q9H269 TM9SF1-206ENST00000528669 2425 ntTSL 5 BASIC21.35■■□□□ 1.01
VPS16Q9H269 LYSMD4-210ENST00000545021 2431 ntTSL 4 BASIC21.35■■□□□ 1.01
VPS16Q9H269 WT1-211ENST00000639907 1545 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 TEX21P-204ENST00000641479 1693 ntBASIC21.34■■□□□ 1.01
VPS16Q9H269 UPF1-201ENST00000262803 5348 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 UMOD-201ENST00000302509 2477 ntAPPRIS P3 TSL 5 BASIC21.34■■□□□ 1.01
VPS16Q9H269 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 KRT6C-201ENST00000252250 2289 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 KRT6B-201ENST00000252252 2282 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 MAPK9-201ENST00000343111 4369 ntTSL 5 BASIC21.34■■□□□ 1.01
VPS16Q9H269 RAX2-201ENST00000555633 2414 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC21.34■■□□□ 1.01
VPS16Q9H269 MIPEPP3-201ENST00000412105 444 ntBASIC21.34■■□□□ 1.01
VPS16Q9H269 GLI3-203ENST00000437480 451 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 LINC01962-201ENST00000513771 411 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 TPD52L1-207ENST00000527711 999 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 C12orf75-205ENST00000549893 719 ntTSL 3 BASIC21.34■■□□□ 1.01
VPS16Q9H269 RAP2CP1-201ENST00000605103 478 ntBASIC21.34■■□□□ 1.01
VPS16Q9H269 PTCRA-204ENST00000616441 1125 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 AC006557.6-201ENST00000623071 864 ntBASIC21.34■■□□□ 1.01
VPS16Q9H269 ARHGEF18-202ENST00000359920 5733 ntAPPRIS ALT2 TSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 PPP1R36-201ENST00000298705 1405 ntAPPRIS P2 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 AC074212.1-201ENST00000559756 1402 ntTSL 3 BASIC21.34■■□□□ 1.01
VPS16Q9H269 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 EVC-201ENST00000264956 6431 ntAPPRIS P1 TSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 AUNIP-203ENST00000538789 1392 ntTSL 1 (best) BASIC21.34■■□□□ 1.01
VPS16Q9H269 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC21.34■■□□□ 1.01
VPS16Q9H269 TMEM70-201ENST00000312184 2018 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS16Q9H269 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC21.33■■□□□ 1.01
VPS16Q9H269 GCGR-202ENST00000570996 1872 ntAPPRIS ALT2 TSL 2 BASIC21.33■■□□□ 1.01
VPS16Q9H269 TTC19-201ENST00000261647 3002 ntAPPRIS P2 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS16Q9H269 BHLHA15-201ENST00000314018 706 ntAPPRIS P1 BASIC21.33■■□□□ 1.01
VPS16Q9H269 N4BP2L1-203ENST00000380133 903 ntAPPRIS P1 TSL 1 (best) BASIC21.33■■□□□ 1.01
VPS16Q9H269 C5orf38-206ENST00000505778 509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.33■■□□□ 1.01
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms