Protein–RNA interactions for Protein: Q9BSQ5

CCM2, Cerebral cavernous malformations 2 protein, humanhuman

Predictions only

Length 444 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2Q9BSQ5 RTKN-201ENST00000233330 2220 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 PPTC7-201ENST00000354300 4996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 CCDC62-204ENST00000392441 2936 ntAPPRIS ALT2 TSL 5 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 PWWP2AP1-201ENST00000429776 2273 ntBASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 MIR718-201ENST00000390190 70 ntBASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 AL590666.2-201ENST00000448869 758 ntTSL 2 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 AL049780.2-201ENST00000556236 367 ntTSL 3 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 KRT18-207ENST00000550600 1696 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 HCN1-202ENST00000634658 4738 ntTSL 3 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 HTR7P1-201ENST00000538670 1336 ntBASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 FAM58A-204ENST00000576892 1306 ntAPPRIS ALT2 TSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 FEZF1-202ENST00000427185 1368 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 ROPN1-209ENST00000495093 1376 ntTSL 1 (best) BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 CNTNAP3B-202ENST00000341990 2666 ntTSL 2 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 DNAH17-AS1-202ENST00000591373 1453 ntTSL 5 BASIC19.16■□□□□ 0.66
CCM2Q9BSQ5 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 MRPL2-202ENST00000388752 1588 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 CLIP3-206ENST00000593074 2080 ntAPPRIS P1 TSL 2 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 PTAR1-205ENST00000472967 1689 ntTSL 2 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 ATP5D-201ENST00000215375 997 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 LYPD1-201ENST00000345008 1033 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 HES2-203ENST00000377837 1222 ntTSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 AP001412.1-201ENST00000608405 714 ntBASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 AC066615.1-201ENST00000640911 628 ntBASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 ARHGAP22-204ENST00000417247 2340 ntTSL 2 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 C18orf25-204ENST00000615553 2329 ntTSL 5 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 TCF7-201ENST00000342854 3045 ntAPPRIS P2 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 CDCA4-201ENST00000336219 2513 ntAPPRIS P1 TSL 1 (best) BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 TSPAN17-202ENST00000310032 2550 ntTSL 5 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 ILF3-217ENST00000589998 2622 ntTSL 2 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 CPEB1-214ENST00000617522 2220 ntTSL 5 BASIC19.15■□□□□ 0.66
CCM2Q9BSQ5 MSANTD2-202ENST00000374979 2349 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.66
CCM2Q9BSQ5 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.14■□□□□ 0.66
CCM2Q9BSQ5 SLC11A2-208ENST00000546743 1740 ntTSL 1 (best) BASIC19.14■□□□□ 0.66
CCM2Q9BSQ5 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 BSX-201ENST00000343035 830 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 C6orf132-202ENST00000356542 894 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 UPK3B-203ENST00000394849 1041 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 GLYCTK-205ENST00000473032 935 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 AC008550.1-201ENST00000511500 884 ntBASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 MIXL1-202ENST00000542034 839 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 AL158211.5-201ENST00000623583 2518 ntBASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 FGFR1-238ENST00000532791 5590 ntAPPRIS ALT1 TSL 5 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 KLHDC2-201ENST00000298307 5514 ntAPPRIS P1 TSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.14■□□□□ 0.65
CCM2Q9BSQ5 NBL1-209ENST00000548815 1953 ntAPPRIS P3 TSL 3 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 STX6-204ENST00000542060 4809 ntTSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 ACADVL-203ENST00000356839 2323 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 LRFN4-201ENST00000309602 2431 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 SLC22A23-205ENST00000436008 6641 ntAPPRIS ALT2 TSL 5 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 SHISA7-201ENST00000376325 6033 ntAPPRIS P2 TSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 SMIM19-201ENST00000414154 793 ntAPPRIS P1 TSL 1 (best) BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 AC012618.2-201ENST00000428058 849 ntBASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 AP000697.1-201ENST00000430607 339 ntTSL 5 BASIC19.13■□□□□ 0.65
CCM2Q9BSQ5 WDR86-AS1-203ENST00000480632 704 ntTSL 1 (best) BASIC19.13■□□□□ 0.65
Retrieved 100 of 98,524 protein–RNA pairs in 30.5 ms