Protein–RNA interactions for Protein: Q96RI1

NR1H4, Bile acid receptor, humanhuman

Predicted RBP Predictions only

Length 486 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H4Q96RI1 P2RY6-202ENST00000393590 2398 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 BFSP1-205ENST00000536626 2075 ntTSL 2 BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 PIK3R2-201ENST00000222254 4033 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
NR1H4Q96RI1 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 ODC1-202ENST00000405333 1943 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 PRKCD-201ENST00000330452 2680 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 PTPN6-204ENST00000456013 2389 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 CDC73-201ENST00000367435 4969 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 TNFRSF6B-201ENST00000369996 1124 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 AL356441.2-201ENST00000443009 864 ntBASIC18.31■□□□□ 0.52
NR1H4Q96RI1 QDPR-206ENST00000508623 601 ntTSL 3 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 PTPA-203ENST00000348141 2737 ntTSL 5 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 PTPA-207ENST00000393370 2737 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 ZNF821-211ENST00000564134 1748 ntTSL 5 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 AP004607.4-201ENST00000530158 1459 ntBASIC18.31■□□□□ 0.52
NR1H4Q96RI1 DGKI-203ENST00000446122 4070 ntAPPRIS ALT2 TSL 5 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 TIMM50-202ENST00000544017 2572 ntAPPRIS P2 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 SOST-201ENST00000301691 2300 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC18.31■□□□□ 0.52
NR1H4Q96RI1 ESYT2-206ENST00000613624 2766 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 TSC22D3-205ENST00000372390 1812 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 FZR1-203ENST00000441788 5212 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 ITGA9-201ENST00000264741 7889 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 DTX2-202ENST00000413936 2472 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 BCL11B-202ENST00000357195 7559 ntAPPRIS P4 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 REPS2-201ENST00000303843 7771 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 CD55-206ENST00000391921 2433 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 NCK1-207ENST00000481752 1971 ntAPPRIS P1 TSL 5 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 ULK2-201ENST00000361658 3908 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 TSSC4-203ENST00000380996 1544 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 FARP2-202ENST00000373287 2580 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 C4orf36-201ENST00000295898 881 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 P2RX2-205ENST00000352418 1200 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 ANAPC13-201ENST00000354910 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 U2AF1-202ENST00000380276 940 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 UBE2E2-203ENST00000425792 1248 ntAPPRIS P1 TSL 2 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 RNF146-206ENST00000480444 843 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 TRAPPC6A-205ENST00000592647 514 ntTSL 2 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 AC092171.4-201ENST00000609130 632 ntBASIC18.3■□□□□ 0.52
NR1H4Q96RI1 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 HMGA2-205ENST00000425208 1444 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 CLSTN1-202ENST00000377298 5221 ntAPPRIS ALT2 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 STRA6-209ENST00000563965 2565 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 HSPA4-205ENST00000617074 2358 ntTSL 5 BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 SUGCT-202ENST00000401647 1369 ntTSL 1 (best) BASIC18.3■□□□□ 0.52
NR1H4Q96RI1 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 DYNC1I1-211ENST00000537881 2146 ntTSL 5 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 NDUFS7-210ENST00000539480 1743 ntTSL 2 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 TRPV4-208ENST00000544971 2295 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 RTKN-203ENST00000305557 2646 ntAPPRIS P3 TSL 5 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 CD276-203ENST00000537340 2439 ntTSL 2 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 EML2-203ENST00000536630 2791 ntAPPRIS ALT2 TSL 2 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 CASZ1-202ENST00000377022 7936 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 SEPHS1-202ENST00000378614 2387 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 LINC01881-206ENST00000614114 957 ntTSL 2 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 MAN2A1-201ENST00000261483 4667 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 PACRGL-227ENST00000513459 1773 ntTSL 5 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 DCLK1-203ENST00000379892 2101 ntTSL 5 BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 MFSD14A-201ENST00000370152 2777 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 SH2B1-216ENST00000618521 2935 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 C3orf33-201ENST00000340171 1884 ntTSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC18.29■□□□□ 0.52
NR1H4Q96RI1 KCNN4-209ENST00000615047 2029 ntTSL 5 BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 SYNE3-202ENST00000553340 2615 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 TNIP1-221ENST00000610874 2629 ntTSL 5 BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 ANKRD13D-216ENST00000514166 2138 ntTSL 2 BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 TIMM50-201ENST00000314349 1612 ntAPPRIS P2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 TAB2-209ENST00000637181 4230 ntAPPRIS P1 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 SLC10A3-202ENST00000369649 1763 ntAPPRIS ALT2 TSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 ST7L-221ENST00000490067 1780 ntTSL 1 (best) BASIC18.28■□□□□ 0.52
NR1H4Q96RI1 FIBIN-201ENST00000318627 1938 ntAPPRIS P1 BASIC18.28■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 30.2 ms