Protein–RNA interactions for Protein: Q96QF0

RAB3IP, Rab-3A-interacting protein, humanhuman

Predicted RBP Predictions only

Length 476 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IPQ96QF0 GRAMD4P7-201ENST00000578182 1232 ntBASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 AC007448.3-201ENST00000585193 689 ntTSL 2 BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 TUBBP5-204ENST00000635438 565 ntTSL 4 BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 PTPRU-202ENST00000373779 5579 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 SEMA3B-209ENST00000456560 2221 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 LHX8-201ENST00000294638 2373 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 UBFD1-201ENST00000395878 5110 ntAPPRIS P2 TSL 2 BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 MGLL-204ENST00000434178 4941 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 ADAM15-207ENST00000368413 1901 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 RNFT2-202ENST00000319176 2180 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 RNFT2-209ENST00000622220 2176 ntTSL 5 BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 MAP4K4-205ENST00000350878 7640 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
RAB3IPQ96QF0 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 FOXO3-202ENST00000406360 7341 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 PHKA1-201ENST00000339490 6121 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 TPD52L1-201ENST00000304877 1468 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 SIRT3-204ENST00000525319 1475 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 SLC47A1-202ENST00000395585 1998 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 ARNTL-205ENST00000403510 2745 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 STK25-201ENST00000316586 4619 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 ZBTB45-201ENST00000354590 2352 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 ULK3-220ENST00000569437 2611 ntAPPRIS ALT1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 IQSEC2-202ENST00000396435 6015 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 SNED1-204ENST00000401884 4538 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 FAM173A-201ENST00000219535 806 ntAPPRIS ALT2 TSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 SLC26A1-203ENST00000398520 1111 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 PTPA-214ENST00000423100 988 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 AC004540.2-202ENST00000451264 508 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 ARHGDIA-217ENST00000584461 886 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 PPP1R14A-204ENST00000591291 433 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 BMP2K-208ENST00000628286 3848 ntAPPRIS ALT2 TSL 5 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 TEX45-201ENST00000361664 1679 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 MAPT-205ENST00000351559 5811 ntAPPRIS ALT2 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 KDELR1-203ENST00000597017 1594 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 AP001271.2-201ENST00000624018 1556 ntBASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 HNRNPLL-202ENST00000358367 2779 ntTSL 5 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 RGL3-202ENST00000393423 2278 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 ESPN-205ENST00000461727 1869 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 TBCB-201ENST00000221855 1473 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 ABHD12B-202ENST00000353130 1477 ntAPPRIS P3 TSL 1 (best) BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 CYB561-204ENST00000448884 1496 ntTSL 2 BASIC18.97■□□□□ 0.63
RAB3IPQ96QF0 PROSER1-201ENST00000352251 5168 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 GRIN3B-201ENST00000234389 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 NPEPL1-203ENST00000525817 1780 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 RIMS4-201ENST00000372851 5203 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 SDR39U1-208ENST00000554698 1364 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 PCDHA8-202ENST00000531613 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 STK25-203ENST00000403346 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 RASSF1-210ENST00000616212 1842 ntTSL 2 BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 IFFO1-202ENST00000356896 2680 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 PDXK-219ENST00000621478 1967 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 ELAVL3-202ENST00000438662 1223 ntAPPRIS ALT1 TSL 5 BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 AL356441.2-201ENST00000443009 864 ntBASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 AL138724.1-201ENST00000606771 1088 ntBASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 SLC16A10-206ENST00000612036 1231 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 BBS5-202ENST00000392663 3107 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 ZBTB42-202ENST00000555360 1411 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 TRIM33-201ENST00000358465 8339 ntAPPRIS P4 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 ACTN3-203ENST00000513398 2939 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 PIP5K1C-205ENST00000589578 2933 ntAPPRIS ALT2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 CCDC157-203ENST00000405659 3052 ntAPPRIS P3 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 KDSR-202ENST00000406396 5447 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 RAB1A-202ENST00000409751 1333 ntTSL 5 BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 SELENOF-201ENST00000331835 1781 ntAPPRIS P2 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.96■□□□□ 0.63
RAB3IPQ96QF0 RAB40C-203ENST00000535977 2717 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 FBXL22-201ENST00000360587 1526 ntAPPRIS P2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 TRIM24-201ENST00000343526 8410 ntAPPRIS P3 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 TES-201ENST00000358204 2782 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 RASSF5-205ENST00000581503 5586 ntTSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 L1CAM-205ENST00000370060 5113 ntAPPRIS P4 TSL 5 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 NOMO3-201ENST00000263012 3911 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 DRAP1-201ENST00000312515 989 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 PTCHD3P2-201ENST00000424937 1205 ntBASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 RPL29-209ENST00000495383 713 ntAPPRIS P1 TSL 2 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 AC139713.2-201ENST00000641328 2723 ntBASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 GATAD2A-202ENST00000360315 5671 ntAPPRIS P3 TSL 5 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 ZBTB10-202ENST00000426744 9878 ntAPPRIS ALT2 TSL 5 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 CARNS1-202ENST00000445895 3971 ntAPPRIS P1 TSL 5 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 AC067852.2-201ENST00000590513 2313 ntBASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 SLC1A5-205ENST00000594991 2031 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 RASL12-202ENST00000421977 1523 ntTSL 2 BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 TADA3-201ENST00000301964 2355 ntAPPRIS P1 TSL 1 (best) BASIC18.95■□□□□ 0.62
RAB3IPQ96QF0 PTP4A3-202ENST00000349124 2710 ntTSL 1 (best) BASIC18.94■□□□□ 0.62
Retrieved 100 of 98,524 protein–RNA pairs in 22.7 ms