Protein–RNA interactions for Protein: Q96J02

ITCH, E3 ubiquitin-protein ligase Itchy homolog, humanhuman

Predictions only

Length 903 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ITCHQ96J02 SNX4-201ENST00000251775 2513 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 EML3-217ENST00000531557 2509 ntTSL 5 BASIC18.53■□□□□ 0.56
ITCHQ96J02 UBE3C-201ENST00000348165 5229 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ITCHQ96J02 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC18.53■□□□□ 0.56
ITCHQ96J02 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC18.53■□□□□ 0.56
ITCHQ96J02 PTH2R-204ENST00000617735 2472 ntTSL 2 BASIC18.52■□□□□ 0.56
ITCHQ96J02 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC18.52■□□□□ 0.56
ITCHQ96J02 CHAC1-205ENST00000617961 1498 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC18.52■□□□□ 0.56
ITCHQ96J02 INAVA-202ENST00000413687 2197 ntAPPRIS P2 TSL 2 BASIC18.52■□□□□ 0.56
ITCHQ96J02 PGP-201ENST00000333503 2727 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 CENPH-206ENST00000515001 1305 ntTSL 2 BASIC18.52■□□□□ 0.56
ITCHQ96J02 FNBP1-203ENST00000443566 5227 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 FOLH1-203ENST00000343844 2258 ntTSL 2 BASIC18.52■□□□□ 0.56
ITCHQ96J02 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 BAG5-201ENST00000299204 4848 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 FAM66E-201ENST00000529252 1433 ntTSL 2 BASIC18.52■□□□□ 0.56
ITCHQ96J02 FAM66B-201ENST00000529456 1432 ntTSL 2 BASIC18.52■□□□□ 0.56
ITCHQ96J02 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 SULF2-201ENST00000359930 4915 ntAPPRIS P4 TSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 VSX1-201ENST00000376707 943 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 GPX1P1-201ENST00000388829 606 ntBASIC18.52■□□□□ 0.56
ITCHQ96J02 AC026271.2-201ENST00000428091 497 ntBASIC18.52■□□□□ 0.56
ITCHQ96J02 LINC01117-201ENST00000443670 699 ntTSL 5 BASIC18.52■□□□□ 0.56
ITCHQ96J02 SLC12A5-217ENST00000626937 1224 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 FAM217A-208ENST00000639338 1929 ntTSL 5 BASIC18.52■□□□□ 0.56
ITCHQ96J02 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
ITCHQ96J02 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC18.52■□□□□ 0.56
ITCHQ96J02 RWDD4-206ENST00000512740 1393 ntTSL 5 BASIC18.52■□□□□ 0.55
ITCHQ96J02 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC18.52■□□□□ 0.55
ITCHQ96J02 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.55
ITCHQ96J02 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.52■□□□□ 0.55
ITCHQ96J02 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.51■□□□□ 0.55
ITCHQ96J02 LARGE2-206ENST00000529052 2459 ntAPPRIS ALT2 TSL 2 BASIC18.51■□□□□ 0.55
ITCHQ96J02 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 TBX6-201ENST00000279386 1796 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 TBX6-205ENST00000627355 1796 ntTSL 5 BASIC18.51■□□□□ 0.55
ITCHQ96J02 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.51■□□□□ 0.55
ITCHQ96J02 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC18.51■□□□□ 0.55
ITCHQ96J02 LIMD2-202ENST00000578061 756 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
ITCHQ96J02 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC18.51■□□□□ 0.55
ITCHQ96J02 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
ITCHQ96J02 ABCB9-202ENST00000344275 2394 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.5■□□□□ 0.55
ITCHQ96J02 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 UBE2QL1-201ENST00000399816 4317 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 SLC38A11-203ENST00000409149 1621 ntAPPRIS P2 TSL 2 BASIC18.5■□□□□ 0.55
ITCHQ96J02 GAR1-201ENST00000226796 1224 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 C11orf86-201ENST00000308963 1187 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ITCHQ96J02 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.5■□□□□ 0.55
ITCHQ96J02 PDCD5-204ENST00000586035 601 ntTSL 3 BASIC18.5■□□□□ 0.55
ITCHQ96J02 POU5F1-209ENST00000638788 369 ntTSL 5 BASIC18.5■□□□□ 0.55
ITCHQ96J02 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC18.5■□□□□ 0.55
ITCHQ96J02 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
ITCHQ96J02 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC18.5■□□□□ 0.55
ITCHQ96J02 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC18.49■□□□□ 0.55
ITCHQ96J02 CITED2-201ENST00000367651 2354 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC18.49■□□□□ 0.55
ITCHQ96J02 ZNF385B-204ENST00000410066 3288 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 TMEM155-201ENST00000337677 2313 ntAPPRIS P2 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 DGKI-202ENST00000424189 4163 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
ITCHQ96J02 AK3-202ENST00000381809 2736 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 DNM1-206ENST00000475805 2710 ntAPPRIS ALT1 TSL 2 BASIC18.49■□□□□ 0.55
ITCHQ96J02 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ITCHQ96J02 NADK-201ENST00000341426 3235 ntAPPRIS P3 TSL 2 BASIC18.49■□□□□ 0.55
ITCHQ96J02 SPATA25-201ENST00000372519 757 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 PGPEP1L-201ENST00000378919 995 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 MCRIP1-203ENST00000538396 925 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 RARRES2P6-201ENST00000567333 442 ntBASIC18.49■□□□□ 0.55
ITCHQ96J02 AC133552.2-202ENST00000575694 574 ntBASIC18.49■□□□□ 0.55
ITCHQ96J02 ATP6V0E2-211ENST00000606024 893 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 ARHGAP27-201ENST00000290470 1376 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.49■□□□□ 0.55
ITCHQ96J02 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC18.49■□□□□ 0.55
ITCHQ96J02 TFP1-202ENST00000475455 1573 ntBASIC18.49■□□□□ 0.55
ITCHQ96J02 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC18.49■□□□□ 0.55
ITCHQ96J02 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 RAB11B-201ENST00000328024 1751 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
ITCHQ96J02 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC18.49■□□□□ 0.55
ITCHQ96J02 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms