Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 QRICH1-201ENST00000357496 3083 ntAPPRIS P1 TSL 2 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 EPB41L3-207ENST00000545076 3190 ntAPPRIS ALT2 TSL 2 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 PCBP4-212ENST00000484633 2009 ntTSL 5 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 ILDR2-207ENST00000529071 2566 ntAPPRIS ALT2 TSL 5 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 ARL2-201ENST00000246747 979 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 PEX7-202ENST00000367756 680 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 RNF5-203ENST00000375094 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 ABCC3-217ENST00000515707 656 ntTSL 3 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 TGIF1-219ENST00000551541 990 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 CLN6-206ENST00000565471 1075 ntTSL 2 BASIC19.82■□□□□ 0.76
CCDC97Q96F63 AC060766.5-201ENST00000590539 871 ntBASIC19.82■□□□□ 0.76
CCDC97Q96F63 AC006557.6-201ENST00000623071 864 ntBASIC19.82■□□□□ 0.76
CCDC97Q96F63 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 YIPF2-201ENST00000253031 2087 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 RAD23A-203ENST00000586534 1746 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 POM121C-208ENST00000615331 5835 ntAPPRIS P2 TSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 PTPN11-202ENST00000392597 1876 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
CCDC97Q96F63 GLT8D1-206ENST00000478968 1826 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 PRKAR1B-212ENST00000544935 2494 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 NOL4L-211ENST00000621426 6577 ntAPPRIS P2 TSL 5 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 IRF3-221ENST00000598808 1468 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 SLK-201ENST00000335753 7673 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 SHISA6-204ENST00000441885 7575 ntAPPRIS P3 TSL 5 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 PMAIP1-201ENST00000269518 1262 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 C10orf76-201ENST00000311122 724 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 VKORC1-204ENST00000394971 664 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 MAGI2-AS3-202ENST00000422093 762 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 AC073111.3-201ENST00000478789 635 ntAPPRIS P1 TSL 3 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 BNIP3L-204ENST00000520409 739 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 RHOD-202ENST00000532559 538 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 NDUFS3-212ENST00000534208 583 ntTSL 4 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 TNFRSF1B-204ENST00000536782 557 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 AC073896.1-201ENST00000549318 937 ntAPPRIS P1 TSL 5 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 ASGR1-204ENST00000572879 797 ntTSL 5 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 KLF2-202ENST00000592003 564 ntTSL 3 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 AL359736.2-201ENST00000621992 437 ntBASIC19.81■□□□□ 0.76
CCDC97Q96F63 HLA-B-256ENST00000639848 1089 ntBASIC19.81■□□□□ 0.76
CCDC97Q96F63 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 KRT8P17-201ENST00000453110 1448 ntBASIC19.81■□□□□ 0.76
CCDC97Q96F63 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 GIT1-201ENST00000225394 3768 ntAPPRIS P3 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 ZNF286A-204ENST00000464847 5616 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 ZNF696-201ENST00000330143 2795 ntAPPRIS P1 TSL 1 (best) BASIC19.81■□□□□ 0.76
CCDC97Q96F63 FAM43B-201ENST00000332947 2572 ntAPPRIS P1 BASIC19.81■□□□□ 0.76
CCDC97Q96F63 CACTIN-202ENST00000248420 2671 ntAPPRIS P1 TSL 5 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 WIZ-201ENST00000263381 5695 ntAPPRIS P2 TSL 2 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 GPR35-202ENST00000403859 2032 ntAPPRIS P3 TSL 2 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 AL445183.2-201ENST00000439621 1871 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 AC092368.3-202ENST00000574180 1591 ntBASIC19.8■□□□□ 0.76
CCDC97Q96F63 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 SCAMP3-201ENST00000302631 1446 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 NGEF-202ENST00000373552 2286 ntAPPRIS P1 TSL 2 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 WDR74-202ENST00000311713 1153 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 MCAT-202ENST00000327555 1134 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 KRT17P3-201ENST00000420566 1262 ntBASIC19.8■□□□□ 0.76
CCDC97Q96F63 AL807752.2-201ENST00000435463 301 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 GCC2-AS1-202ENST00000440975 574 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 SMIM20-201ENST00000506197 935 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 LINC01301-204ENST00000530725 577 ntTSL 4 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 AL031963.3-201ENST00000606441 850 ntBASIC19.8■□□□□ 0.76
CCDC97Q96F63 SLC35A2-213ENST00000635015 1008 ntTSL 2 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 IRF7-201ENST00000330243 1992 ntAPPRIS P4 TSL 5 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 AC124283.5-201ENST00000624661 1809 ntBASIC19.8■□□□□ 0.76
CCDC97Q96F63 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 TMEM79-201ENST00000295694 2191 ntAPPRIS P1 TSL 1 (best) BASIC19.8■□□□□ 0.76
CCDC97Q96F63 NPAS1-207ENST00000602189 1643 ntTSL 5 BASIC19.8■□□□□ 0.76
CCDC97Q96F63 RGP1-201ENST00000378078 7018 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 KIAA1456-201ENST00000400069 1982 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 KDM5C-204ENST00000375401 6031 ntAPPRIS P3 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 HDAC2-201ENST00000368632 2084 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 TMEM214-203ENST00000404032 2830 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 CBWD3-201ENST00000360171 2165 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 HES2-206ENST00000489730 730 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 CERNA3-201ENST00000521403 557 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 PNMA6B-201ENST00000538162 1200 ntBASIC19.79■□□□□ 0.76
CCDC97Q96F63 UBALD1-209ENST00000591897 1275 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 AC011446.2-202ENST00000592882 756 ntTSL 3 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 CD99-210ENST00000611428 1243 ntAPPRIS ALT2 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 UBAP1-204ENST00000625521 2029 ntTSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 UBXN11-201ENST00000314675 2254 ntAPPRIS ALT2 TSL 2 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 PCNX3-201ENST00000355703 7105 ntAPPRIS P1 TSL 5 BASIC19.79■□□□□ 0.76
CCDC97Q96F63 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 ITSN2-201ENST00000355123 6300 ntAPPRIS P4 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 TMEM65-201ENST00000297632 9029 ntAPPRIS P1 TSL 1 (best) BASIC19.79■□□□□ 0.76
CCDC97Q96F63 GAREM2-202ENST00000407684 5138 ntTSL 2 BASIC19.79■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 23.7 ms