Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 SOX15-203ENST00000570788 1093 ntBASIC19.86■□□□□ 0.77
RTP4Q96DX8 MORC4-201ENST00000255495 2940 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.86■□□□□ 0.77
RTP4Q96DX8 PPM1B-201ENST00000282412 2606 ntAPPRIS P4 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC19.86■□□□□ 0.77
RTP4Q96DX8 AL691447.2-201ENST00000454869 2162 ntTSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 AL161938.1-201ENST00000569833 2180 ntBASIC19.85■□□□□ 0.77
RTP4Q96DX8 RSAD1-201ENST00000258955 2528 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 SMPD3-203ENST00000563226 2093 ntTSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 ABI3-202ENST00000419580 1718 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 NDOR1-203ENST00000427047 2315 ntTSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 GORASP1-220ENST00000479927 1345 ntTSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 HIBADH-201ENST00000265395 1990 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 UPP1-201ENST00000331803 1932 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 PRORSD1P-201ENST00000295112 541 ntBASIC19.85■□□□□ 0.77
RTP4Q96DX8 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 ASMTL-AS1-203ENST00000425740 840 ntTSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 NCF1B-202ENST00000432102 930 ntTSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 STPG4-207ENST00000445927 891 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 COX6C-208ENST00000522940 694 ntAPPRIS P1 TSL 3 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 PNN-205ENST00000556530 601 ntTSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 PRORSD1P-203ENST00000579162 626 ntTSL 5 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 PARD3-207ENST00000374788 5996 ntAPPRIS ALT1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 ANGPTL4-201ENST00000301455 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 HSPB2-C11orf52-202ENST00000534100 1521 ntAPPRIS ALT2 TSL 2 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 DTX4-201ENST00000227451 5642 ntAPPRIS P1 TSL 1 (best) BASIC19.85■□□□□ 0.77
RTP4Q96DX8 RAVER2-201ENST00000294428 4398 ntAPPRIS ALT2 TSL 5 BASIC19.85■□□□□ 0.77
RTP4Q96DX8 L2HGDH-203ENST00000421284 1958 ntAPPRIS P1 TSL 2 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 B4GALT5-201ENST00000371711 4722 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 ORAI2-204ENST00000473939 2493 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 NDUFV3-202ENST00000354250 1575 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 DACT2-204ENST00000610183 2088 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 HOXB9-201ENST00000311177 2581 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 ANKDD1B-204ENST00000601380 2569 ntAPPRIS P1 TSL 5 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 TNIK-208ENST00000465393 750 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 LEF1-AS1-203ENST00000507799 459 ntTSL 3 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 AP001458.2-201ENST00000528405 577 ntAPPRIS P1 TSL 4 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 CLN6-207ENST00000566347 981 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 AC113189.1-201ENST00000570444 327 ntTSL 3 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 FAM32A-205ENST00000589852 1168 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 FFAR3-202ENST00000594310 1182 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 TRAM1L1-201ENST00000310754 2023 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 ACD-202ENST00000393919 1974 ntAPPRIS ALT2 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 ANKRD65-201ENST00000427211 1976 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 SLC27A1-204ENST00000598424 2681 ntTSL 2 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 SMAD7-201ENST00000262158 3087 ntAPPRIS P3 TSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 CDK18-217ENST00000506784 2143 ntTSL 1 (best) BASIC19.84■□□□□ 0.77
RTP4Q96DX8 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC19.84■□□□□ 0.77
RTP4Q96DX8 FBXL16-203ENST00000562563 2257 ntTSL 2 BASIC19.83■□□□□ 0.77
RTP4Q96DX8 SDHAP1-207ENST00000440850 2000 ntBASIC19.83■□□□□ 0.77
RTP4Q96DX8 DNAJC11-201ENST00000294401 2210 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTP4Q96DX8 QTRT1-201ENST00000250237 1317 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTP4Q96DX8 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.83■□□□□ 0.77
RTP4Q96DX8 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC19.83■□□□□ 0.77
RTP4Q96DX8 AC093503.3-201ENST00000624917 2352 ntBASIC19.83■□□□□ 0.77
RTP4Q96DX8 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.83■□□□□ 0.77
RTP4Q96DX8 AC004408.2-201ENST00000623613 2777 ntBASIC19.83■□□□□ 0.77
RTP4Q96DX8 KIF22-201ENST00000160827 2113 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTP4Q96DX8 SPDYE2-201ENST00000341656 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTP4Q96DX8 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTP4Q96DX8 SPDYE2B-202ENST00000455020 1219 ntAPPRIS ALT2 TSL 1 (best) BASIC19.83■□□□□ 0.77
RTP4Q96DX8 C14orf28-204ENST00000557112 1097 ntTSL 5 BASIC19.83■□□□□ 0.77
RTP4Q96DX8 DET1-205ENST00000558413 583 ntTSL 4 BASIC19.83■□□□□ 0.77
RTP4Q96DX8 INO80E-214ENST00000620599 515 ntTSL 2 BASIC19.83■□□□□ 0.77
RTP4Q96DX8 PTGER3-203ENST00000354608 1470 ntAPPRIS ALT2 TSL 5 BASIC19.83■□□□□ 0.76
RTP4Q96DX8 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
RTP4Q96DX8 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTP4Q96DX8 AC012414.5-201ENST00000564214 1602 ntTSL 5 BASIC19.83■□□□□ 0.76
RTP4Q96DX8 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTP4Q96DX8 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC19.83■□□□□ 0.76
RTP4Q96DX8 P2RY6-212ENST00000618468 2431 ntAPPRIS P1 TSL 3 BASIC19.83■□□□□ 0.76
RTP4Q96DX8 ERMP1-202ENST00000339450 5376 ntAPPRIS P1 TSL 1 (best) BASIC19.83■□□□□ 0.76
RTP4Q96DX8 TCTA-201ENST00000273590 2146 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC19.82■□□□□ 0.76
RTP4Q96DX8 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 EGFL7-202ENST00000371698 1282 ntAPPRIS P1 TSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 MAP1LC3A-203ENST00000397709 698 ntAPPRIS P1 TSL 3 BASIC19.82■□□□□ 0.76
RTP4Q96DX8 KHDRBS1-204ENST00000492989 1215 ntTSL 1 (best) BASIC19.82■□□□□ 0.76
RTP4Q96DX8 AC093827.2-201ENST00000512654 315 ntBASIC19.82■□□□□ 0.76
Retrieved 100 of 98,524 protein–RNA pairs in 47.7 ms