Protein–RNA interactions for Protein: Q96AX1

VPS33A, Vacuolar protein sorting-associated protein 33A, humanhuman

Predictions only

Length 596 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33AQ96AX1 MICU2-201ENST00000382374 1920 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 AC254629.1-202ENST00000618276 2112 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 RHOD-201ENST00000308831 1129 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 ZNF644-203ENST00000361321 1253 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 C17orf74-202ENST00000574034 1287 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 IFFO1-212ENST00000619571 2724 ntTSL 2 BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 TMEM176B-203ENST00000434545 1303 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC18.68■□□□□ 0.58
VPS33AQ96AX1 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 FN3K-201ENST00000300784 1434 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 PLCXD1-202ENST00000381663 1863 ntAPPRIS P2 TSL 5 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 ADAMTS17-201ENST00000268070 6207 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 LETM1P2-201ENST00000597330 2178 ntBASIC18.67■□□□□ 0.58
VPS33AQ96AX1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 GGTLC1-201ENST00000278765 974 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 LRR1-202ENST00000318317 957 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 FAM207A-202ENST00000397826 880 ntAPPRIS ALT1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 BET1L-204ENST00000410108 637 ntTSL 3 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 PTGER2-202ENST00000557436 643 ntTSL 3 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 DHRS4-207ENST00000559632 1003 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 ARFRP1-202ENST00000607873 1061 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 AL589743.5-201ENST00000616611 1050 ntBASIC18.67■□□□□ 0.58
VPS33AQ96AX1 CIRBP-246ENST00000628979 1043 ntTSL 2 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 AC008694.1-202ENST00000636953 945 ntBASIC18.67■□□□□ 0.58
VPS33AQ96AX1 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 MMP28-204ENST00000615136 2033 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 AL049812.1-201ENST00000432563 2267 ntBASIC18.67■□□□□ 0.58
VPS33AQ96AX1 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 CNIH3-201ENST00000272133 2558 ntAPPRIS P1 TSL 1 (best) BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 ZBTB10-205ENST00000610895 2833 ntAPPRIS ALT2 TSL 2 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 PCID2-202ENST00000337344 1898 ntAPPRIS P1 TSL 2 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 MTA1-207ENST00000435036 2888 ntTSL 5 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 DBN1-210ENST00000512501 1878 ntTSL 3 BASIC18.67■□□□□ 0.58
VPS33AQ96AX1 SLC12A5-210ENST00000616202 2445 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 CASP16P-202ENST00000575497 2161 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 FAM170B-201ENST00000311787 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 AC010980.2-201ENST00000587099 1412 ntBASIC18.66■□□□□ 0.58
VPS33AQ96AX1 CWH43-201ENST00000226432 2472 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 NPDC1-202ENST00000371601 1494 ntAPPRIS P2 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 TBXA2R-202ENST00000411851 1494 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 CASD1-201ENST00000297273 3942 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 PHLDB3-201ENST00000292140 2591 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 WIPF1-205ENST00000409415 1772 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 TRABD-201ENST00000303434 2329 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 KRT17P1-201ENST00000399211 1546 ntBASIC18.66■□□□□ 0.58
VPS33AQ96AX1 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 AC012313.1-204ENST00000444227 462 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 HIGD1A-204ENST00000452906 585 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 BX890604.1-207ENST00000486571 904 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 NDUFS3-207ENST00000529276 558 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 NEDD4L-225ENST00000589054 1033 ntTSL 3 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 AL161938.1-201ENST00000569833 2180 ntBASIC18.66■□□□□ 0.58
VPS33AQ96AX1 FAM213B-201ENST00000378424 2765 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 SPRYD7-204ENST00000613924 2285 ntTSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 SIRT3-202ENST00000524564 1395 ntTSL 2 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 TSSC4-207ENST00000451491 1423 ntAPPRIS P3 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
VPS33AQ96AX1 AC018553.1-201ENST00000616682 1458 ntBASIC18.65■□□□□ 0.58
VPS33AQ96AX1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 RNF114-201ENST00000244061 2503 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 CNOT11-201ENST00000289382 2599 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 GRB10-208ENST00000403097 5432 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 RAB1A-204ENST00000409892 2254 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 GRTP1-201ENST00000326039 1294 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 TSPAN2-201ENST00000369515 793 ntTSL 3 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 AC006015.1-201ENST00000429970 570 ntBASIC18.65■□□□□ 0.58
VPS33AQ96AX1 APTR-203ENST00000430801 583 ntTSL 5 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 SEC11A-208ENST00000559729 1256 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 AC092143.4-201ENST00000570217 559 ntTSL 4 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 FAM222B-208ENST00000581381 556 ntTSL 4 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 MYO19-221ENST00000620640 1186 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 ZDHHC16-202ENST00000352634 1718 ntAPPRIS ALT1 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 TRABD-203ENST00000395827 2172 ntAPPRIS P3 TSL 5 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC18.65■□□□□ 0.58
VPS33AQ96AX1 SLC25A3-201ENST00000188376 1909 ntAPPRIS ALT1 TSL 1 (best) BASIC18.64■□□□□ 0.58
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms