Protein–RNA interactions for Protein: Q8WXH6

RAB40A, Ras-related protein Rab-40A, humanhuman

Predictions only

Length 277 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAB40AQ8WXH6 TNFRSF1A-201ENST00000162749 2223 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 PARP15-202ENST00000464300 2156 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 DUT-201ENST00000331200 2147 ntTSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 LAG3-201ENST00000203629 1974 ntAPPRIS P2 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 DPYSL5-202ENST00000401478 1972 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 AC069431.1-201ENST00000488882 1877 ntTSL 5 BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 UXS1-203ENST00000409501 1839 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 SMC4-201ENST00000344722 5356 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.33
RAB40AQ8WXH6 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 P2RY6-210ENST00000542092 1674 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 TGIF1-207ENST00000407501 1585 ntAPPRIS P1 TSL 3 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 ESR1-210ENST00000456483 1368 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 SAC3D1-205ENST00000531072 1362 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 MMP23B-202ENST00000378675 1309 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 UBE2C-201ENST00000243893 476 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 TRPT1-201ENST00000317459 962 ntAPPRIS P3 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 NAA20-202ENST00000334982 1260 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 MMP25-204ENST00000612971 1017 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 HCG11-201ENST00000411553 5696 ntBASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 CLMP-201ENST00000448775 5072 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 MEN1-206ENST00000377321 2614 ntTSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 SHANK1-202ENST00000359082 6459 ntTSL 5 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 CGRRF1-201ENST00000216420 2057 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 DBNL-217ENST00000468694 2068 ntAPPRIS ALT2 TSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 DOLPP1-203ENST00000406974 2037 ntTSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC17.08■□□□□ 0.32
RAB40AQ8WXH6 KAZN-203ENST00000376030 6030 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 MAEA-213ENST00000510794 1607 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 MORN1-202ENST00000378529 1500 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 SLC25A39-212ENST00000590194 1542 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 PGR-201ENST00000263463 2496 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 PCCA-203ENST00000376286 2481 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 PGAP3-206ENST00000579146 2220 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 ACY1-207ENST00000476854 1319 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 CYP26A1-201ENST00000224356 2125 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 EGLN2-201ENST00000303961 2102 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 CUEDC2-201ENST00000369937 1191 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 SAPCD2P1-201ENST00000395413 1184 ntBASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 EMC6-202ENST00000397133 762 ntAPPRIS P1 TSL 2 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 RAMP1-202ENST00000403885 650 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 C4orf48-202ENST00000409860 477 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 FTCDNL1-202ENST00000420128 1021 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 PGM5P4-201ENST00000421970 445 ntBASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 PPP1R14BP2-201ENST00000426284 444 ntBASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 AC099522.1-201ENST00000505955 881 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 KLF13-207ENST00000560473 489 ntTSL 3 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 ZNF263-205ENST00000574253 1139 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 AC092118.2-201ENST00000613495 667 ntBASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 AC100791.3-201ENST00000617619 330 ntBASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 AC013268.5-201ENST00000454928 1959 ntTSL 2 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 ARHGAP22-210ENST00000477708 1951 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 KLHDC10-201ENST00000335420 6437 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 PCDH1-201ENST00000287008 4793 ntAPPRIS P3 TSL 5 BASIC17.07■□□□□ 0.32
RAB40AQ8WXH6 DSCAM-201ENST00000400454 8552 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 AUH-202ENST00000375731 1577 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 SLC25A24P1-201ENST00000411846 1569 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 SLC2A7-201ENST00000400906 1539 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 TBXA2R-201ENST00000375190 2608 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 BLOC1S3-201ENST00000433642 2601 ntAPPRIS P1 TSL 2 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 CDC42SE2-206ENST00000503291 2025 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 CNRIP1-201ENST00000263655 1953 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 TRIM7-205ENST00000422067 1954 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 DESI2-201ENST00000263831 859 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 CT47A12-201ENST00000419982 1165 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 HTT-AS-201ENST00000503893 515 ntTSL 4 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 TRAPPC5-203ENST00000595985 411 ntTSL 3 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 CD55-201ENST00000314754 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 PML-204ENST00000359928 1726 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 LDLRAD4-211ENST00000587757 2171 ntTSL 2 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 ETS1-208ENST00000535549 4594 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 GPR78-201ENST00000382487 1694 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 PITPNC1-201ENST00000299954 6359 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 PNKP-215ENST00000600910 1600 ntTSL 5 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 ACBD4-207ENST00000586346 1579 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 AC020763.4-201ENST00000623414 4170 ntBASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 SLC25A41-201ENST00000321510 1532 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 KIAA1522-204ENST00000401073 5438 ntAPPRIS P3 TSL 2 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 KRT15-203ENST00000393976 2394 ntAPPRIS P1 TSL 5 BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
RAB40AQ8WXH6 MED26-207ENST00000611692 1444 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
RAB40AQ8WXH6 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 28.4 ms