Protein–RNA interactions for Protein: Q8WWF3

SSMEM1, Serine-rich single-pass membrane protein 1, humanhuman

Predictions only

Length 244 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SSMEM1Q8WWF3 TNFRSF25-203ENST00000351959 1441 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 PKMYT1-204ENST00000440027 2061 ntTSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 RTBDN-207ENST00000589272 2076 ntTSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 CIRBP-215ENST00000588030 1509 ntAPPRIS P3 TSL 5 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 DMRT2-205ENST00000382255 2367 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 IFI6-203ENST00000362020 828 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 S100A14-203ENST00000368701 1080 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 PSMG1-202ENST00000380900 907 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 TSPAN4-209ENST00000409543 1031 ntAPPRIS P1 TSL 5 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 HES2-206ENST00000489730 730 ntTSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 HDDC3-202ENST00000394272 1880 ntAPPRIS P1 TSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 TTC34-201ENST00000401095 8814 ntAPPRIS ALT2 TSL 5 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 TCF3P1-201ENST00000423021 1937 ntBASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 DLGAP4-206ENST00000475894 3110 ntAPPRIS ALT2 TSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 SLC39A4-201ENST00000276833 2297 ntTSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 OGG1-205ENST00000344629 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 PRPS1-203ENST00000372428 1748 ntTSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 NPNT-214ENST00000514622 2362 ntTSL 2 BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 ZNF324B-202ENST00000545523 2368 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.17
SSMEM1Q8WWF3 LMLN-204ENST00000420910 2423 ntAPPRIS P2 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 TP53BP2-202ENST00000391878 4741 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 KLC1-219ENST00000555836 2467 ntTSL 5 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 NDOR1-204ENST00000458322 1829 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 AC120498.9-201ENST00000339021 3867 ntBASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 B4GALNT1-208ENST00000550764 1967 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 ANG-201ENST00000336811 1222 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 HDAC11-205ENST00000404548 577 ntTSL 4 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 DMRT2-206ENST00000412350 1244 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 GCFC2-207ENST00000470503 1066 ntTSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 RARRES2P10-201ENST00000564312 460 ntBASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 HAGHL-213ENST00000564545 663 ntTSL 3 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 AL121906.2-201ENST00000621597 723 ntBASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 CD247-202ENST00000392122 1678 ntAPPRIS ALT1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 GPR62-201ENST00000322241 2191 ntAPPRIS P1 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 BACE2-202ENST00000330333 2993 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 SPAG16-204ENST00000413312 2258 ntTSL 5 BASIC16.1■□□□□ 0.17
SSMEM1Q8WWF3 ADAM33-202ENST00000356518 3677 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 INTS12-206ENST00000451321 1975 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 UBE2L6-202ENST00000340573 1573 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 CSNK1D-203ENST00000392334 2047 ntAPPRIS ALT1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 CDKN1C-203ENST00000430149 1570 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 SNX7-205ENST00000529992 1589 ntTSL 2 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 PTPA-204ENST00000355007 2515 ntTSL 5 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 NCLN-205ENST00000590671 2070 ntTSL 2 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 KANK4-204ENST00000371153 4665 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 HCG11-201ENST00000411553 5696 ntBASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 MFSD10-211ENST00000514800 1776 ntTSL 5 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 MRPS24-201ENST00000317534 707 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 DYNLRB1-203ENST00000374846 1044 ntTSL 5 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 FKBP2-202ENST00000394540 1002 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 AL390719.1-201ENST00000427998 977 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 UBE2K-204ENST00000503368 891 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 AC035140.1-201ENST00000507957 493 ntTSL 3 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 NUBP2-206ENST00000565134 815 ntTSL 5 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 AL049637.2-201ENST00000641778 930 ntBASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 MID2-201ENST00000262843 2876 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 CHP2-201ENST00000300113 2382 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 ACVR1B-201ENST00000257963 4563 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 PLEKHH3-204ENST00000591022 2983 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 PLSCR3-212ENST00000576201 1965 ntAPPRIS P1 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 QSOX2-201ENST00000358701 4530 ntAPPRIS P1 TSL 2 BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 SMG8-203ENST00000578922 2178 ntBASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 ECEL1-201ENST00000304546 2865 ntAPPRIS P3 TSL 1 (best) BASIC16.09■□□□□ 0.17
SSMEM1Q8WWF3 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC16.08■□□□□ 0.17
SSMEM1Q8WWF3 TIMP4-201ENST00000287814 1650 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SSMEM1Q8WWF3 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC16.08■□□□□ 0.17
SSMEM1Q8WWF3 SLC2A8-215ENST00000610552 1763 ntTSL 3 BASIC16.08■□□□□ 0.17
SSMEM1Q8WWF3 CCT5-205ENST00000506600 1939 ntTSL 2 BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 RAB11FIP4-201ENST00000394744 1968 ntTSL 2 BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 FOXI1-202ENST00000449804 2011 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 LIME1-201ENST00000309546 1178 ntAPPRIS P3 TSL 1 (best) BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 PDCD2-202ENST00000392090 936 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 LINC00894-209ENST00000458274 547 ntTSL 2 BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 MNX1-AS1-201ENST00000480284 1041 ntTSL 1 (best) BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 TK2-204ENST00000525974 1178 ntTSL 2 BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 RPH3AL-203ENST00000536489 1235 ntTSL 2 BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC16.08■□□□□ 0.16
SSMEM1Q8WWF3 MMP25-AS1-204ENST00000572574 794 ntTSL 5 BASIC16.08■□□□□ 0.16
Retrieved 100 of 98,524 protein–RNA pairs in 40.2 ms