Protein–RNA interactions for Protein: Q8TDR0

TRAF3IP1, TRAF3-interacting protein 1, humanhuman

Predicted RBP Predictions only

Length 691 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3IP1Q8TDR0 FRRS1L-201ENST00000561981 8197 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF3IP1Q8TDR0 TOM1L1-202ENST00000445275 2228 ntTSL 2 BASIC20.27■□□□□ 0.84
TRAF3IP1Q8TDR0 AKNA-205ENST00000374079 2138 ntTSL 1 (best) BASIC20.27■□□□□ 0.84
TRAF3IP1Q8TDR0 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC20.27■□□□□ 0.83
TRAF3IP1Q8TDR0 HOXC4-201ENST00000303406 1524 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF3IP1Q8TDR0 GPR135-201ENST00000395116 4578 ntAPPRIS P1 BASIC20.27■□□□□ 0.83
TRAF3IP1Q8TDR0 CAV3-201ENST00000343849 1431 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.83
TRAF3IP1Q8TDR0 HLA-G-201ENST00000360323 1427 ntAPPRIS P2 BASIC20.27■□□□□ 0.83
TRAF3IP1Q8TDR0 PDLIM3-212ENST00000620787 2352 ntTSL 4 BASIC20.27■□□□□ 0.83
TRAF3IP1Q8TDR0 AC020763.4-201ENST00000623414 4170 ntBASIC20.27■□□□□ 0.83
TRAF3IP1Q8TDR0 USP32-201ENST00000300896 5171 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 STARD10-201ENST00000334805 1963 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 TM7SF3-201ENST00000343028 2709 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 BRSK1-201ENST00000309383 3079 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 HR-202ENST00000381418 6336 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 SETD7-202ENST00000404104 1590 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 COL16A1-203ENST00000373672 5736 ntAPPRIS P1 TSL 5 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 SNX27-203ENST00000368843 7197 ntAPPRIS P3 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 IFI27L2-201ENST00000238609 511 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 NDUFB1-201ENST00000329559 528 ntTSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 MRPS26-201ENST00000380325 1127 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 NCBP2-207ENST00000452404 1133 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 SOX15-202ENST00000538513 1050 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 PLEKHB1-216ENST00000543085 632 ntTSL 3 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 SOX15-203ENST00000570788 1093 ntBASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 CIRBP-213ENST00000587323 1092 ntTSL 5 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 HSD17B12-213ENST00000637401 866 ntTSL 4 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 CACNA1B-204ENST00000371357 9642 ntAPPRIS ALT2 TSL 5 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 NCAN-201ENST00000252575 6387 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC20.26■□□□□ 0.83
TRAF3IP1Q8TDR0 FAM83E-201ENST00000263266 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 PIGQ-204ENST00000409527 1915 ntAPPRIS P1 TSL 2 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 VSTM2B-201ENST00000335523 1488 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 SLC3A2-206ENST00000535296 2084 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 TLE4-205ENST00000376544 4871 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 FGFR3-202ENST00000340107 4293 ntAPPRIS ALT2 TSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 SDHC-201ENST00000342751 1127 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 HLA-L-209ENST00000420110 1011 ntBASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 TMEM218-207ENST00000528724 1117 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 TMEM218-214ENST00000532156 954 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 EML2-AS1-202ENST00000591087 838 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 SLC16A5-206ENST00000580123 2019 ntAPPRIS P2 TSL 2 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 SNCA-203ENST00000394986 1420 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 RENBP-201ENST00000369997 1322 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC20.25■□□□□ 0.83
TRAF3IP1Q8TDR0 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 ENTPD8-204ENST00000472938 1749 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 MORF4L1-215ENST00000559345 1468 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 THTPA-202ENST00000404535 1779 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 AC092849.2-201ENST00000492523 333 ntTSL 3 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 SEC23A-AS1-201ENST00000557350 500 ntTSL 3 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 INO80E-214ENST00000620599 515 ntTSL 2 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 RAB11FIP2-202ENST00000369199 6119 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 FDFT1-209ENST00000525900 1596 ntTSL 5 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
TRAF3IP1Q8TDR0 INPP5J-203ENST00000401755 1751 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 UBR3-203ENST00000418381 7951 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 AP006587.1-201ENST00000534129 1502 ntBASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 COL5A3-201ENST00000264828 6174 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 ARHGEF28-203ENST00000426542 6118 ntAPPRIS ALT2 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 HOXA6-201ENST00000222728 989 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 LIPT2-201ENST00000310109 1018 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 AC068473.1-201ENST00000317008 1111 ntTSL 2 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 CAPN12-201ENST00000328867 2762 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 HOXB2-201ENST00000330070 1562 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 MAFF-202ENST00000407965 2325 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 AC008667.2-201ENST00000504413 469 ntTSL 3 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 COX4I1-202ENST00000561569 716 ntAPPRIS P1 TSL 2 BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 FAM219B-212ENST00000565772 1249 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 TXNL4A-203ENST00000585474 1185 ntTSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 AC120498.8-201ENST00000614275 531 ntBASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 ZNF12-204ENST00000405858 5051 ntAPPRIS P4 TSL 1 (best) BASIC20.23■□□□□ 0.83
TRAF3IP1Q8TDR0 DUT-202ENST00000455976 1935 ntAPPRIS P1 TSL 1 (best) BASIC20.23■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms